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  5. AT5G48310

AT5G48310


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0002840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48310
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00104430 evm_27.TU.AmTr_v1... No description available 0.13 OrthoFinder output from all 47 species
Aev_g30228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46644 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g48683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06288 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Aspi01Gene35489.t2 Aspi01Gene35489 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009826 No alias not classified & original description: CDS=337-4263 0.04 OrthoFinder output from all 47 species
Cba_g14978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G053000.1 Ceric.14G053000 not classified & original description: pacid=50633866... 0.12 OrthoFinder output from all 47 species
Ceric.28G050300.1 Ceric.28G050300 not classified & original description: pacid=50570129... 0.08 OrthoFinder output from all 47 species
Cre06.g278212 No alias No description available 0.06 OrthoFinder output from all 47 species
Dac_g13551 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g13433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13512 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
GSVIVT01030144001 No alias No description available 0.34 OrthoFinder output from all 47 species
Gb_02174 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_04081 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g10490.1 LOC_Os02g10490 no hits & (original description: none) 0.27 OrthoFinder output from all 47 species
LOC_Os02g52280.1 LOC_Os02g52280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37322 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g39844 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10107198g0010 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
MA_1132025g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_134242g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32509g0010 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
MA_7663039g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp1g17040.1 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Nbi_g25115 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Ore_g30529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17841 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018471 No alias not classified & original description: CDS=256-3912 0.02 OrthoFinder output from all 47 species
Sam_g07979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo93144 No alias No description available 0.12 OrthoFinder output from all 47 species
Solyc04g076100.4.1 Solyc04g076100 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc07g056060.4.1 Solyc07g056060 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Spa_g39806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014046_P002 Zm00001e014046 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!