AT5G48030 (GFA2)

Aliases : GFA2

Description : gametophytic factor 2

Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G48030

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0005.g009035	GFA2	co-chaperone *(Hsp40) & original description: CDS=214-1557	0.04	OrthoFinder output from all 47 species
Ceric.30G021400.1	GFA2, Ceric.30G021400	co-chaperone *(Hsp40) & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g11133	GFA2	co-chaperone *(Hsp40) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g07253	GFA2	co-chaperone *(Hsp40) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10433752g0010	GFA2	Chaperone protein dnaJ GFA2, mitochondrial...	0.04	OrthoFinder output from all 47 species
Nbi_g24757	GFA2	co-chaperone *(Hsp40) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g11912	No alias	co-chaperone (GFA2) involved in gametogenesis & original...	0.01	OrthoFinder output from all 47 species
Solyc01g086740.3.1	GFA2, Solyc01g086740	co-chaperone (Hsp40)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000740	nuclear membrane fusion	IMP	Interproscan
BP	GO:0000741	karyogamy	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006457	protein folding	ISS	Interproscan
BP	GO:0006458	'de novo' protein folding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007349	cellularization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009553	embryo sac development	IMP	Interproscan
BP	GO:0009558	embryo sac cellularization	IMP	Interproscan
BP	GO:0009560	embryo sac egg cell differentiation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010197	polar nucleus fusion	IMP	Interproscan
BP	GO:0010198	synergid death	IMP	Interproscan
BP	GO:0010623	programmed cell death involved in cell development	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0051084	'de novo' post-translational protein folding	None	Extended
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IGI	Interproscan
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0061025	membrane fusion	None	Extended
BP	GO:0061077	chaperone-mediated protein folding	None	Extended
BP	GO:0071763	nuclear membrane organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090174	organelle membrane fusion	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006626	protein targeting to mitochondrion	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0070585	protein localization to mitochondrion	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001623	DnaJ_domain	94	156
IPR001305	HSP_DnaJ_Cys-rich_dom	238	297
IPR002939	DnaJ_C	212	424

External Links

No external refs found!

AT5G48030 (GFA2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation