AT5G47670 (NF-YB6, L1L)

Aliases : NF-YB6, L1L

Description : nuclear factor Y, subunit B6

Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G47670
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00239530	NF-YB3,...	RNA biosynthesis.transcriptional activation.NF-Y...	0.02	OrthoFinder output from all 47 species
AMTR_s00057p00202310	NF-YB5,...	RNA biosynthesis.transcriptional activation.NF-Y...	0.05	OrthoFinder output from all 47 species
Adi_g021371	NF-YB8	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Als_g04110	NF-YB6, L1L	transcription factor *(LEC) involved in seed maturation...	0.02	OrthoFinder output from all 47 species
Aop_g03074	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Aop_g70431	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Aspi01Gene16041.t1	NF-YB6, L1L,...	transcription factor *(LEC) involved in seed maturation...	0.04	OrthoFinder output from all 47 species
Azfi_s0293.g063460	EMB212, NF-YB9,...	transcription factor *(LEC) involved in seed maturation...	0.03	OrthoFinder output from all 47 species
Azfi_s1600.g104553	EMB212, NF-YB9,...	transcription factor *(LEC) involved in seed maturation...	0.03	OrthoFinder output from all 47 species
Ceric.08G068900.1	EMB212, NF-YB9,...	transcription factor *(LEC) involved in seed maturation...	0.02	OrthoFinder output from all 47 species
Ceric.18G000500.1	NF-YB3, Ceric.18G000500	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Dac_g16411	NF-YB6, L1L	transcription factor *(LEC) involved in seed maturation...	0.03	OrthoFinder output from all 47 species
Dac_g21439	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01002895001	NF-YB6, L1L	RNA biosynthesis.transcriptional activation.NF-Y...	0.13	OrthoFinder output from all 47 species
GSVIVT01014689001	NF-YB6, L1L	RNA biosynthesis.transcriptional activation.NF-Y...	0.04	OrthoFinder output from all 47 species
GSVIVT01014690001	NF-YB6, L1L	RNA biosynthesis.transcriptional activation.NF-Y...	0.11	OrthoFinder output from all 47 species
Gb_00064	NF-YB6, L1L	component NF-YB of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
Gb_24990	NF-YB6, L1L	component NF-YB of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Gb_40846	EMB212, NF-YB9,...	component NF-YB of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
LOC_Os02g49410.1	EMB212, NF-YB9,...	component NF-YB of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species
LOC_Os07g41580.1	NF-YB3, LOC_Os07g41580	component NF-YB of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Msp_g09416	NF-YB2	component *(NF-YB) of NF-Y transcription factor complex...	0.04	OrthoFinder output from all 47 species
Ore_g19132	NF-YB6, L1L	transcription factor *(LEC) involved in seed maturation...	0.04	OrthoFinder output from all 47 species
Ore_g28570	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Ore_g43754	NF-YB6, L1L	transcription factor *(LEC) involved in seed maturation...	0.03	OrthoFinder output from all 47 species
Pnu_g04888	NF-YB6, L1L	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g10547	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.04	OrthoFinder output from all 47 species
Pnu_g12457	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Ppi_g04264	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Solyc04g015060.3.1	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
Solyc05g005390.3.1	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.08	OrthoFinder output from all 47 species
Solyc05g015550.2.1	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.07	OrthoFinder output from all 47 species
Solyc06g009010.1.1	NF-YB5, Solyc06g009010	component NF-YB of NF-Y transcription factor complex	0.08	OrthoFinder output from all 47 species
Solyc09g074760.1.1	NF-YB5, Solyc09g074760	component NF-YB of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Solyc10g009440.4.1	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.08	OrthoFinder output from all 47 species
Tin_g21109	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Zm00001e015699_P001	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
Zm00001e015700_P001	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species
Zm00001e018715_P001	NF-YB5, Zm00001e018715	component NF-YB of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
Zm00001e021676_P001	NF-YB3, Zm00001e021676	component NF-YB of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species
Zm00001e023433_P001	NF-YB6, L1L,...	component NF-YB of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Zm00001e035517_P001	NF-YB3, Zm00001e035517	component NF-YB of NF-Y transcription factor complex	0.06	OrthoFinder output from all 47 species
Zm00001e036848_P001	EMB212, NF-YB9,...	component NF-YB of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	IEP	HCCA
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
MF	GO:0004738	pyruvate dehydrogenase activity	IEP	HCCA
MF	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010020	chloroplast fission	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
CC	GO:0016602	CCAAT-binding factor complex	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0019915	lipid storage	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043572	plastid fission	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
MF	GO:0044620	ACP phosphopantetheine attachment site binding	IEP	HCCA
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
MF	GO:0051192	prosthetic group binding	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140414	phosphopantetheine-dependent carrier activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003958	CBFA_NFYB_domain	62	126

External Links

No external refs found!

AT5G47670 (NF-YB6, L1L)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation