AT5G47260

Description : ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G47260
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00238210	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g14610...	0.04	OrthoFinder output from all 47 species
AMTR_s00009p00245910	RPS2,...	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AMTR_s00062p00146080	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00121p00125720	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61180...	0.04	OrthoFinder output from all 47 species
AMTR_s00203p00014010	RFL1,...	Disease resistance protein RFL1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00771p00010380	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
AT1G12220	RPS5	Disease resistance protein (CC-NBS-LRR class) family	0.06	OrthoFinder output from all 47 species
AT1G12290	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT1G52660	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
AT1G61180	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	OrthoFinder output from all 47 species
AT1G61190	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.07	OrthoFinder output from all 47 species
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	OrthoFinder output from all 47 species
AT3G15700	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT4G26090	RPS2	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT4G27190	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT5G43730	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	OrthoFinder output from all 47 species
AT5G63020	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
Adi_g074819	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g32394	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014595001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01015167001	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01017136001	No alias	Probable disease resistance protein At1g61190...	0.02	OrthoFinder output from all 47 species
GSVIVT01017149001	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01025877001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
GSVIVT01038391001	No alias	Probable disease resistance protein At1g12290...	0.04	OrthoFinder output from all 47 species
GSVIVT01038404001	No alias	Probable disease resistance protein At1g12290...	0.02	OrthoFinder output from all 47 species
Gb_01077	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Gb_12853	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_16713	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_22529	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_26475	RPS5	Putative disease resistance protein RGA3 OS=Solanum...	0.03	OrthoFinder output from all 47 species
LOC_Os01g72680.1	RPS5, LOC_Os01g72680	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os03g14900.1	LOC_Os03g14900	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g36410.1	RPS5, LOC_Os11g36410	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10432804g0010	No alias	Putative disease resistance protein At4g10780...	0.03	OrthoFinder output from all 47 species
MA_10436071g0010	No alias	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
MA_125257g0010	No alias	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
MA_23524g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_421862g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_5216516g0010	No alias	Probable disease resistance protein At5g63020...	0.02	OrthoFinder output from all 47 species
MA_690530g0010	No alias	Probable disease resistance protein At5g43730...	0.03	OrthoFinder output from all 47 species
MA_728287g0010	No alias	Probable disease resistance protein At1g61300...	0.02	OrthoFinder output from all 47 species
MA_77943g0010	No alias	Putative disease resistance protein At4g10780...	0.03	OrthoFinder output from all 47 species
Pir_g33524	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c3_1460V3.1	Pp3c3_1460	Disease resistance protein (CC-NBS-LRR class) family	0.01	OrthoFinder output from all 47 species
Solyc06g048910.2.1	Solyc06g048910	Disease resistance protein At4g27190 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc08g007250.3.1	Solyc08g007250	Disease resistance protein At4g27190 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc10g076440.1.1	Solyc10g076440	Disease resistance protein At4g27190 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc12g005520.1.1	RPS5, Solyc12g005520	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0045036	protein targeting to chloroplast	RCA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072596	establishment of protein localization to chloroplast	None	Extended
BP	GO:0072598	protein localization to chloroplast	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004407	histone deacetylase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0019213	deacetylase activity	IEP	HCCA
MF	GO:0033558	protein lysine deacetylase activity	IEP	HCCA
BP	GO:0042752	regulation of circadian rhythm	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006703	G_AIG1	883	940
IPR002182	NB-ARC	155	390

External Links

No external refs found!

AT5G47260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation