Heatmap: Cluster_26 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G12210 (RFL1)
2.01 0.99 0.1 -1.77 0.48 -0.14 -2.2 -4.21 -6.3 -5.7 -7.6 -3.68 - 0.46 0.46 0.11 -1.58 -1.41 -2.02 0.81 -0.53 0.67 0.82 -0.88 -0.03 -0.71 0.32 0.23 0.74 -0.36 0.23 0.49 -0.79 -1.16 0.15 -0.86 2.24 0.44 0.88 -2.81 -2.53 -0.21 -1.57 1.03 -0.39 - 0.91 -0.08
-1.57 -0.9 - -6.7 - - - - -5.55 -8.18 -4.39 -2.73 - -2.35 4.26 - - - -4.29 -4.27 - -2.85 - -2.6 - - 0.97 -3.09 2.64 - -3.58 - 0.32 2.54 -2.44 -2.04 2.19 1.69 -0.24 -8.95 - 0.33 - -0.74 -0.77 - - -2.32
AT1G21210 (WAK4)
2.09 -1.45 -1.92 -0.11 0.64 - 0.05 - - - - - - -2.07 - -3.37 -2.01 - -1.6 -0.92 - - -3.47 -3.58 -3.93 -2.58 -1.48 0.41 0.9 -2.99 -2.98 -1.46 -2.48 -2.78 -2.72 -0.25 1.5 -1.22 2.06 - - -1.43 -2.85 - 3.76 3.41 - -3.56
AT1G21230 (WAK5)
- - - - - - - - - -0.17 - - - - - - - - - - - - 1.39 -3.1 - - - - 0.03 - - - -0.64 0.36 0.33 - 1.25 -1.91 -0.7 - - - - - 5.21 - - -
- - - - - - - - - - - - 4.53 - - - - - - - - - - - - - - - - - - - - 3.09 - - 3.85 0.97 - - - - - - - - - -
-1.86 1.18 2.68 2.14 2.49 0.27 2.73 -4.54 -2.33 -2.25 -3.57 -0.58 -0.45 -1.41 -0.12 -2.03 -2.11 - -0.86 0.65 -1.94 -2.06 -0.18 -1.74 -2.03 -3.71 -3.13 2.16 0.29 -0.97 0.01 -1.07 -1.68 -1.8 -0.5 -1.0 -3.17 -0.84 -2.45 -0.32 - - -3.91 -3.33 - 0.01 -0.15 -5.1
0.57 -4.02 0.23 -2.33 -1.0 - - - - - -4.44 - - 0.54 -1.27 -1.74 -3.54 -3.65 -3.11 -2.74 -4.69 0.95 3.6 -4.72 - -4.79 - -4.18 0.68 - -5.76 -4.92 -1.64 -4.99 2.77 2.38 3.05 2.27 -2.16 -3.21 -2.4 - -3.27 - - - - -
AT1G65890 (AAE12)
0.28 1.07 -5.11 -5.94 - - - - - - - - - -1.18 -0.31 -2.82 -0.91 -0.76 -3.08 0.31 -6.04 -1.77 -0.18 -0.36 - -1.03 -3.24 -3.08 4.52 - -0.52 -3.42 0.11 -2.76 -0.09 0.11 2.57 1.81 -0.83 -4.87 - -1.45 - - -0.65 - - -
AT1G66370 (MYB113)
- -2.74 - - - -2.18 - 3.39 -0.24 1.96 -0.12 3.02 1.59 -1.75 2.39 -5.16 -1.67 2.32 -0.63 -4.37 - -3.09 - -8.07 -0.13 - - - - 0.13 - -5.83 -3.62 - -0.08 1.42 0.51 0.54 -5.24 - - - - - - - - -
- -3.6 - -2.47 - - -3.54 - -4.82 - -5.54 - - -3.39 -3.42 -1.59 - - -7.43 -4.99 -5.85 -3.35 - -2.95 -4.76 -2.74 -1.68 - -4.28 -7.27 -4.8 - -1.89 0.2 -8.47 -2.23 4.67 1.26 3.13 - -1.75 2.88 -3.39 -3.7 -2.59 - - -
2.69 -0.73 4.22 2.06 2.91 -1.81 1.29 - - - - - - -1.13 -1.36 -1.83 -1.63 -2.89 -2.54 -0.64 - -0.33 -0.86 -4.09 - -2.57 - -0.72 -1.82 - -1.85 -3.96 -1.72 -4.19 -1.1 - -1.45 -2.04 -4.55 - - - -0.78 -0.75 - - - -3.52
-2.88 -1.61 2.4 3.19 2.33 1.26 3.13 -0.08 0.52 0.15 -0.17 - 1.67 -2.59 - - -1.2 - 1.63 -3.4 - - -0.43 - - -1.65 - - 0.94 - -0.77 -2.82 -0.03 -1.07 -3.46 - - -1.6 - - - - - - - - - -
-2.88 -1.61 2.4 3.19 2.33 1.26 3.13 -0.08 0.52 0.15 -0.17 - 1.67 -2.59 - - -1.2 - 1.63 -3.4 - - -0.43 - - -1.65 - - 0.94 - -0.77 -2.82 -0.03 -1.07 -3.46 - - -1.6 - - - - - - - - - -
3.21 1.31 - 1.29 1.11 - - - - - -21.9 - - -0.59 - - - 1.17 - 0.27 - - - -3.41 - - - - 2.63 -0.51 -0.26 0.45 -1.0 - 1.91 - 2.31 -0.68 -1.53 - - - - 1.96 1.42 - -0.86 0.08
- - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
AT2G25295 (LCR81)
- 2.85 - - - - - - - - - - - 1.87 - - - - - -0.47 - - - 1.48 - -1.3 0.57 - 0.47 - 4.9 - - - - - - - -1.09 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.93 -2.71 - 1.49 - 4.29 2.37 1.97 - - - 0.16
0.55 1.29 0.71 -1.11 -0.17 -2.19 -2.57 -5.31 -5.13 -4.4 - -2.95 - 0.31 -1.41 -1.54 -0.91 1.33 -1.46 1.61 1.69 0.09 1.52 -0.43 -3.52 -2.0 0.22 -0.68 -0.37 -3.44 1.52 -1.25 -4.45 -2.03 1.03 1.92 2.85 -0.1 0.62 -3.76 - -2.8 -1.73 -0.13 -1.39 - - -2.18
0.32 1.21 2.42 1.15 2.18 1.4 -0.03 - - -4.9 -4.27 -2.49 - -2.0 1.31 -4.35 -2.33 0.63 -0.92 0.65 -0.57 -1.25 -1.59 -1.13 -2.02 -1.22 0.64 -1.78 1.88 -3.2 -0.12 -2.86 -3.38 -3.87 -0.49 -0.31 2.05 -0.62 -0.16 1.52 - -2.22 - 0.62 -3.14 - -7.24 -1.13
-0.93 1.3 - 4.0 0.41 - 1.11 - - - 0.97 - - -0.74 - 1.89 - 1.69 0.85 -0.41 - 1.06 - 0.08 - - - 1.13 - - - - - 0.42 -1.07 - - -1.35 -0.27 - - - - 1.69 - - - 0.95
AT3G28890 (RLP43)
2.55 -3.19 -1.13 -1.37 -0.56 -1.94 -1.47 -2.68 -3.68 -6.31 -3.87 - 0.83 1.38 -1.31 0.28 - -4.4 -0.76 -3.08 -5.74 0.46 0.77 0.22 - -0.42 -1.41 -2.51 2.2 -6.45 -3.38 -7.37 -3.68 -2.2 -0.57 1.77 1.32 2.15 3.47 - - -3.7 -5.53 - -5.62 - - -6.8
- - - 5.05 - - - - - - - - - - - - - - - - - - - -0.46 - - - - 3.61 - - - - 0.06 - - - -0.84 -1.87 - - - - - - - - -
0.06 -0.64 -2.14 -1.68 -2.64 -2.25 -1.8 1.28 0.14 1.32 0.89 -6.53 0.95 0.11 -0.84 0.31 -1.96 -1.39 0.34 -0.9 1.09 -1.04 -0.26 -1.2 -3.88 -0.96 -0.77 -1.22 0.06 -6.08 -1.75 -0.04 -1.36 -0.5 -1.24 -0.03 2.09 0.65 1.64 -0.35 -6.99 1.63 0.83 -0.09 1.47 -1.94 -11.06 0.12
AT3G44660 (hda10)
0.8 2.11 1.98 2.22 1.96 2.74 0.98 -1.46 - - -0.55 -0.73 -2.01 -0.19 0.85 1.25 -0.51 - -3.0 -0.04 - 1.84 - -0.93 - -3.97 - - 0.81 - -2.25 -0.77 -3.7 -1.09 -1.89 -0.38 - 0.32 -1.51 - - - -0.79 - -0.01 - - -0.75
- -3.48 2.49 - 4.11 -3.52 - - - -3.17 - - - -4.69 -2.17 -2.67 -1.73 - 3.25 -3.44 - -3.67 - 1.25 -3.5 1.66 - - -0.82 - -5.85 -1.43 -2.45 -1.51 - 1.35 - 0.68 -5.39 - - 0.57 -0.57 - 0.02 - - -
-1.51 -0.92 0.48 0.74 1.63 0.68 0.54 0.46 - - -0.89 - - 0.55 - 0.08 0.05 0.43 - 0.06 - -1.18 0.89 -0.3 - -0.27 - -0.54 0.04 - -0.81 0.38 -1.72 -0.92 0.59 -0.78 1.78 2.13 -0.88 - - 0.29 2.08 1.48 -0.65 0.54 -2.83 -0.38
- -3.59 - - -0.72 - -2.97 - - - - - -0.59 - - -0.45 - - -0.72 -4.25 - - - -3.23 - -4.18 - - -1.46 -3.83 - - -1.66 -4.1 - - 5.38 -0.06 0.54 - - - - - - - - -
- - - - - - - - - - - - - 3.41 - 4.14 - - - - 2.4 - - - - - - - - - - - - - - - - 2.36 0.71 2.95 - - - - - - - -
-0.81 -2.96 3.41 2.58 3.73 2.97 3.08 -3.2 -0.97 -3.93 -3.0 - - -4.99 - - - - -2.1 -5.48 - - - -10.05 - - - - - - -7.06 -6.73 - - -8.42 - - - - - - - - - - - - -
AT4G00630 (KEA2)
1.67 0.35 0.21 -0.06 -0.53 -2.51 -0.04 -6.45 -5.76 -7.47 -6.06 -6.02 -5.12 0.51 -0.37 0.27 -0.84 -1.05 -1.26 0.58 -0.19 0.7 0.97 -0.38 -2.2 -0.18 0.69 1.21 -0.27 -4.0 0.24 0.3 0.22 -0.25 0.46 -0.24 0.98 0.26 0.71 -1.17 -0.78 0.68 0.52 1.12 1.17 -3.01 -0.76 0.43
4.5 -2.08 2.15 2.46 2.04 - 3.12 - - - - - -0.17 - - - - - -2.99 -4.08 - - - -3.75 - -3.09 - - - -2.91 - - - - -2.82 - - -5.63 - - - - - -0.38 - - - -
- 2.52 - 4.14 - - 3.56 - - - - - - 1.25 - - - - - -0.08 - - - 0.16 - - - - - - 2.58 - - - - - - -0.28 0.65 - - - - - - - - -
-5.17 -2.29 - - - - - - - - - - - -3.51 -4.11 -4.14 - - -6.8 -2.19 -5.31 -1.74 -1.7 -7.25 -4.51 -7.27 -0.04 -2.74 -0.23 - -6.62 -1.38 -1.28 1.94 -8.11 -1.36 4.56 -0.75 0.92 - - -0.48 -2.52 2.62 2.28 - -9.67 0.74
AT4G15280 (UGT71B5)
- -2.98 -6.69 -4.91 - -3.97 - - - - - - - -3.15 -3.84 -5.01 -6.69 - - -2.94 - -2.43 -2.02 -6.1 -2.84 -6.28 -0.67 -3.2 -2.4 -6.26 -7.3 -1.17 -1.74 0.04 -8.07 -1.53 4.97 -2.4 0.84 -5.37 -1.54 -0.69 -3.61 2.66 0.54 - -7.85 0.61
0.5 3.61 2.27 - - - 2.77 - - - - - - 0.09 - -0.77 - 0.92 - 0.53 - 0.29 0.22 -4.27 - - - - -0.44 - 0.96 - - -0.91 0.29 1.25 1.22 -0.33 -1.17 2.28 - - - - - - - -
- 2.48 - - - - - - - - - - 3.18 - 2.37 - - 3.22 0.36 1.29 - - 1.37 -4.22 - - - - - - - 1.63 -0.11 2.99 - - - - -0.84 - - - - - - - - -
- -5.0 - -3.0 -2.01 -8.17 - - - -3.16 -3.1 - - - - 2.78 2.66 0.27 -0.15 0.17 -7.41 -1.89 - 0.54 1.93 1.75 1.83 -6.68 - -0.99 -4.43 0.16 -0.71 - -0.89 2.61 2.95 0.81 - - - - - - - - -4.4 -
AT5G10140 (FLC)
-1.24 -4.34 2.11 0.85 1.79 -1.06 1.19 -4.38 -4.2 -4.94 -3.93 0.61 -5.29 -0.28 -5.06 -4.05 -5.74 -6.0 -0.51 -5.14 - -6.08 -4.79 -1.54 2.24 -1.83 -4.37 1.96 0.11 2.73 -6.94 0.97 0.46 1.65 1.08 -1.95 -1.21 2.05 -0.25 - -3.9 -5.13 -1.91 -5.45 -7.04 - -8.15 -4.4
AT5G19470 (NUDT24)
- - - 0.55 - 0.75 -0.4 - - - -0.59 - -0.34 - - 0.82 - - - - - - - -5.0 - - - - 3.08 - - - 4.86 - - - -0.38 -1.0 1.07 - - - - - - - - -
4.01 0.18 -1.22 -0.87 -0.53 -0.99 - - - - -1.35 - 0.87 1.52 0.46 -1.42 -3.13 - -3.7 0.09 - -1.88 -0.9 -0.48 - -1.97 1.95 -2.81 0.4 - 0.49 -1.8 -0.23 -0.9 -0.52 -0.6 -1.42 -1.39 -0.87 - 2.57 -0.35 - -1.26 -2.84 - - -1.68
3.67 -1.44 - 1.17 0.1 1.42 - - - - - - - - - - - - - 0.26 - - - - - - - - 2.46 - - -0.51 - -0.16 -1.14 - 2.03 1.63 2.32 - - - 1.35 2.44 - - - -
-5.47 0.79 -0.09 -0.45 0.89 0.33 0.73 - -2.46 -0.39 -0.9 -0.46 -1.76 0.97 - 0.79 - -2.55 -1.43 -0.59 1.22 1.84 -0.28 -0.17 -1.42 -0.24 - 0.84 -2.43 -3.86 -3.03 - 1.22 0.69 -1.4 - - -0.35 0.22 2.96 - 0.49 -1.01 -0.42 - 1.66 -0.62 -0.18
AT5G35490 (MRU1)
- -0.07 - - - - - - - - - - - 2.7 - - - - - - - - - 1.48 - - - - - - - - 2.61 1.07 - - - 4.29 3.32 - - - - - - - - -
5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.16 2.51 1.84 1.65 2.46 - 1.27 - - - - - - 0.76 - - - - - -0.55 - - 0.7 -0.88 - -0.4 -0.25 - - -2.14 1.39 0.3 -0.8 0.11 -1.73 -0.37 0.46 -0.11 -0.01 -0.18 - - - 1.89 0.71 - - -0.48
-5.58 -2.03 - - - - -2.08 - - -6.92 - - -3.51 3.45 -1.92 -2.56 -0.4 -5.03 - -3.19 - -2.55 -1.38 -0.82 -1.57 -0.27 0.67 - -2.82 -0.14 -3.11 0.51 2.78 1.31 0.79 -2.39 -0.07 0.71 -0.54 0.3 0.35 3.37 -0.74 -4.9 -0.78 - - -4.61
- 5.19 - - - - - - - - - - - - - - - - - - - - - - - - - - -0.26 - - - - - - - - 3.42 -3.85 - - - - - - - - -
- -1.83 3.22 - - - - - - - - 2.01 - -0.35 - - - - - 2.67 - - 2.71 -0.5 - 0.62 - - - - - 0.03 - - - - - - -2.1 - - - - - - 4.11 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.