AT5G46700 (TET1, TRN2)


Aliases : TET1, TRN2

Description : Tetraspanin family protein


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G46700

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene19319.t1 TET8, Aspi01Gene19319 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g49630.1 TET6, LOC_Os02g49630 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g03140.1 TET4, LOC_Os05g03140 Tetraspanin-3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g059390.3.1 TET2, Solyc03g059390 Tetraspanin-2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g006280.3.1 TET8, Solyc07g006280 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e004417_P001 TET10, Zm00001e004417 Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0007389 pattern specification process RCA Interproscan
BP GO:0007568 aging ISS Interproscan
BP GO:0008361 regulation of cell size RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009926 auxin polar transport RCA Interproscan
BP GO:0009933 meristem structural organization IMP Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0009956 radial pattern formation IMP Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010015 root morphogenesis IMP Interproscan
BP GO:0010015 root morphogenesis RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0010073 meristem maintenance RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
BP GO:0040007 growth RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010088 phloem development IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0022622 root system development IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048731 system development IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 6 251
No external refs found!