AT5G44790 (RAN1, HMA7)

Aliases : RAN1, HMA7

Description : copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)

Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G44790

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10562	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.04	OrthoFinder output from all 47 species
Ala_g22606	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Als_g10280	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Als_g48426	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene09120.t1	RAN1, HMA7,...	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene15494.t1	HMA5, Aspi01Gene15494	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene63022.t2	HMA5, Aspi01Gene63022	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.06	OrthoFinder output from all 47 species
Aspi01Gene70950.t1	HMA5, Aspi01Gene70950	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.06	OrthoFinder output from all 47 species
Cba_g14669	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Ceric.04G057700.1	RAN1, HMA7,...	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Ceric.08G061800.1	HMA5, Ceric.08G061800	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.06	OrthoFinder output from all 47 species
Dac_g14927	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.08	OrthoFinder output from all 47 species
Dcu_g01902	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Dcu_g32732	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Dde_g48896	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Ehy_g29726	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.05	OrthoFinder output from all 47 species
LOC_Os04g46940.1	HMA5, LOC_Os04g46940	P1B-type heavy metal cation-transporting ATPase (HMA)	0.03	OrthoFinder output from all 47 species
Len_g48959	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
MA_21335g0010	HMA5	P1B-type heavy metal cation-transporting ATPase (HMA)	0.05	OrthoFinder output from all 47 species
MA_909878g0010	HMA5	P1B-type heavy metal cation-transporting ATPase (HMA)	0.03	OrthoFinder output from all 47 species
Msp_g07743	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.04	OrthoFinder output from all 47 species
Msp_g15457	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.05	OrthoFinder output from all 47 species
Nbi_g13275	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.04	OrthoFinder output from all 47 species
Ore_g28432	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Pir_g12611	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.06	OrthoFinder output from all 47 species
Pir_g38063	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Ppi_g02370	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Smo231359	HMA5	Solute transport.primary active transport.P-type ATPase...	0.05	OrthoFinder output from all 47 species
Smo233397	RAN1, HMA7	Solute transport.primary active transport.P-type ATPase...	0.04	OrthoFinder output from all 47 species
Smo84115	HMA5	Solute transport.primary active transport.P-type ATPase...	0.03	OrthoFinder output from all 47 species
Solyc08g080890.3.1	HMA5, Solyc08g080890	P1B-type heavy metal cation-transporting ATPase (HMA)	0.03	OrthoFinder output from all 47 species
Solyc11g062100.1.1	HMA5, Solyc11g062100	P1B-type heavy metal cation-transporting ATPase (HMA)	0.03	OrthoFinder output from all 47 species
Spa_g12130	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Zm00001e007286_P002	HMA5, Zm00001e007286	P1B-type heavy metal cation-transporting ATPase (HMA)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0000303	response to superoxide	RCA	Interproscan
BP	GO:0000305	response to oxygen radical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	IGI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006486	protein glycosylation	None	Extended
BP	GO:0006487	protein N-linked glycosylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007165	signal transduction	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	RCA	Interproscan
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IMP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009873	ethylene-activated signaling pathway	IMP	Interproscan
BP	GO:0009873	ethylene-activated signaling pathway	RCA	Interproscan
BP	GO:0009873	ethylene-activated signaling pathway	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010119	regulation of stomatal movement	IMP	Interproscan
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015662	P-type ion transporter activity	ISS	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140358	P-type transmembrane transporter activity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	137	197
IPR006121	HMA_dom	62	120

External Links

No external refs found!

AT5G44790 (RAN1, HMA7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation