AT5G44635 (MCM6)

Aliases : MCM6

Description : minichromosome maintenance (MCM2/3/5) family protein

Gene families : OG0006617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006617_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G44635
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00068p00194270	MCM6,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.04	OrthoFinder output from all 47 species
Als_g05373	MCM6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06769	MCM6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39726	MCM6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g08840	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Ceric.09G019700.1	MCM6, Ceric.09G019700	component *(MCM6) of MCM replicative DNA helicase...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020918.5	MCM6	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.04	OrthoFinder output from all 47 species
Dac_g15310	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
GSVIVT01003253001	MCM6	DNA replication licensing factor MCM6 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_23970	MCM6	component MCM6 of MCM replicative DNA helicase complex	0.05	OrthoFinder output from all 47 species
LOC_Os05g14590.1	MCM6, LOC_Os05g14590	component MCM6 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
Len_g31435	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
MA_15713g0010	MCM6	component MCM6 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
Mp4g14930.1	MCM6	component MCM6 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
Msp_g06026	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Nbi_g01354	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Ppi_g04649	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006902	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Sam_g08416	No alias	component *(MCM6) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Tin_g10680	MCM6	component *(MCM6) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Zm00001e031306_P002	MCM6, Zm00001e031306	component MCM6 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006268	DNA unwinding involved in DNA replication	TAS	Interproscan
BP	GO:0006270	DNA replication initiation	ISS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0004844	uracil DNA N-glycosylase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005697	telomerase holoenzyme complex	IEP	HCCA
CC	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	IEP	HCCA
CC	GO:0005849	mRNA cleavage factor complex	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006261	DNA-templated DNA replication	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006301	postreplication repair	IEP	HCCA
BP	GO:0006304	DNA modification	IEP	HCCA
BP	GO:0006305	DNA alkylation	IEP	HCCA
BP	GO:0006306	DNA methylation	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006378	mRNA polyadenylation	IEP	HCCA
BP	GO:0006379	mRNA cleavage	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
BP	GO:0009560	embryo sac egg cell differentiation	IEP	HCCA
BP	GO:0009640	photomorphogenesis	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0016444	somatic cell DNA recombination	IEP	HCCA
BP	GO:0016569	obsolete covalent chromatin modification	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	HCCA
CC	GO:0030894	replisome	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
BP	GO:0032205	negative regulation of telomere maintenance	IEP	HCCA
BP	GO:0032210	regulation of telomere maintenance via telomerase	IEP	HCCA
BP	GO:0032211	negative regulation of telomere maintenance via telomerase	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042162	telomeric DNA binding	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
CC	GO:0042555	MCM complex	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
CC	GO:0043601	nuclear replisome	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
BP	GO:0044728	DNA methylation or demethylation	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051302	regulation of cell division	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	HCCA
MF	GO:0097506	deaminated base DNA N-glycosylase activity	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1904356	regulation of telomere maintenance via telomere lengthening	IEP	HCCA
BP	GO:1904357	negative regulation of telomere maintenance via telomere lengthening	IEP	HCCA
BP	GO:2000278	regulation of DNA biosynthetic process	IEP	HCCA
BP	GO:2000279	negative regulation of DNA biosynthetic process	IEP	HCCA
BP	GO:2001251	negative regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033762	MCM_OB	120	248
IPR027925	MCM_N	19	113
IPR001208	MCM_dom	333	555

External Links

No external refs found!

AT5G44635 (MCM6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation