Description : Pectin lyase-like superfamily protein
Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00141260 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.02 | OrthoFinder output from all 47 species | |
Aev_g24119 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g43887 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g07714 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g13749 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g20386 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g11539 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g20477 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g12302 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g16676 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.09G023500.1 | Ceric.09G023500 | EC_3.2 glycosylase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.38G048100.1 | Ceric.38G048100 | EC_3.2 glycosylase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.39G027100.1 | Ceric.39G027100 | EC_3.2 glycosylase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g02823 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g08388 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g26793 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01019405001 | No alias | Probable polygalacturonase OS=Vitis vinifera | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026985001 | No alias | Probable polygalacturonase OS=Vitis vinifera | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01028057001 | No alias | Probable polygalacturonase OS=Vitis vinifera | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01028860001 | No alias | Probable polygalacturonase OS=Vitis vinifera | 0.04 | OrthoFinder output from all 47 species | |
Gb_17217 | No alias | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g43160.1 | LOC_Os01g43160 | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g15690.1 | LOC_Os02g15690 | Probable polygalacturonase OS=Vitis vinifera... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g50960.1 | LOC_Os05g50960 | Probable polygalacturonase OS=Vitis vinifera... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g43750.1 | LOC_Os11g43750 | Probable polygalacturonase OS=Vitis vinifera... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g36810.1 | LOC_Os12g36810 | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | OrthoFinder output from all 47 species | |
Len_g07468 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g09858 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g23995 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g38310 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g06926 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g31187 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g06175 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g15019 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03906 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g61919 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g50056 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g009790.4.1 | Solyc06g009790 | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g081480.3.1 | Solyc08g081480 | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g39268 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g11741 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006249_P001 | Zm00001e006249 | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024829_P001 | Zm00001e024829 | Probable polygalacturonase OS=Vitis vinifera... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e026646_P002 | Zm00001e026646 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034257_P001 | Zm00001e034257 | Probable polygalacturonase OS=Vitis vinifera... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | ISS | Interproscan |
CC | GO:0005576 | extracellular region | ISM | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
BP | GO:0000280 | nuclear division | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
CC | GO:0005794 | Golgi apparatus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0006997 | nucleus organization | IEP | HCCA |
BP | GO:0007000 | nucleolus organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007020 | microtubule nucleation | IEP | HCCA |
BP | GO:0008356 | asymmetric cell division | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | HCCA |
BP | GO:0009740 | gibberellic acid mediated signaling pathway | IEP | HCCA |
BP | GO:0009786 | regulation of asymmetric cell division | IEP | HCCA |
BP | GO:0009791 | post-embryonic development | IEP | HCCA |
BP | GO:0009886 | post-embryonic animal morphogenesis | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
CC | GO:0009986 | cell surface | IEP | HCCA |
BP | GO:0010016 | shoot system morphogenesis | IEP | HCCA |
BP | GO:0010154 | fruit development | IEP | HCCA |
BP | GO:0010162 | seed dormancy process | IEP | HCCA |
BP | GO:0010311 | lateral root formation | IEP | HCCA |
BP | GO:0010476 | gibberellin mediated signaling pathway | IEP | HCCA |
BP | GO:0010638 | positive regulation of organelle organization | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
MF | GO:0019199 | transmembrane receptor protein kinase activity | IEP | HCCA |
BP | GO:0022611 | dormancy process | IEP | HCCA |
CC | GO:0030139 | endocytic vesicle | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
CC | GO:0031209 | SCAR complex | IEP | HCCA |
CC | GO:0031410 | cytoplasmic vesicle | IEP | HCCA |
CC | GO:0031982 | vesicle | IEP | HCCA |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | HCCA |
BP | GO:0032970 | regulation of actin filament-based process | IEP | HCCA |
MF | GO:0038023 | signaling receptor activity | IEP | HCCA |
MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
CC | GO:0046658 | obsolete anchored component of plasma membrane | IEP | HCCA |
BP | GO:0048439 | flower morphogenesis | IEP | HCCA |
BP | GO:0048507 | meristem development | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
BP | GO:0048825 | cotyledon development | IEP | HCCA |
BP | GO:0048829 | root cap development | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051125 | regulation of actin nucleation | IEP | HCCA |
BP | GO:0051127 | positive regulation of actin nucleation | IEP | HCCA |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051302 | regulation of cell division | IEP | HCCA |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | HCCA |
BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | HCCA |
CC | GO:0097708 | intracellular vesicle | IEP | HCCA |
BP | GO:0110053 | regulation of actin filament organization | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | HCCA |
BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | HCCA |
BP | GO:1905393 | plant organ formation | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 142 | 420 |
No external refs found! |