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  5. AT5G39960

AT5G39960


Description : GTP binding;GTP binding


Gene families : OG0004671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39960

Target Alias Description ECC score Gene Family Method Actions
Dcu_g14837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22088 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g12540.1 LOC_Os01g12540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_708045g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g08765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016417_P001 Zm00001e016417 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000281 mitotic cytokinesis IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0004835 tubulin-tyrosine ligase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP HCCA
BP GO:0010070 zygote asymmetric cell division IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP HCCA
BP GO:0010425 DNA methylation on cytosine within a CNG sequence IEP HCCA
CC GO:0010445 nuclear dicing body IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010589 leaf proximal/distal pattern formation IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
MF GO:0030619 U1 snRNA binding IEP HCCA
MF GO:0030620 U2 snRNA binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031054 pre-miRNA processing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
MF GO:0034046 poly(G) binding IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035195 miRNA-mediated gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
MF GO:0035198 miRNA binding IEP HCCA
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043487 regulation of RNA stability IEP HCCA
BP GO:0043488 regulation of mRNA stability IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050779 RNA destabilization IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0061014 positive regulation of mRNA catabolic process IEP HCCA
BP GO:0061157 mRNA destabilization IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070717 poly-purine tract binding IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
BP GO:1903313 positive regulation of mRNA metabolic process IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 320 443
IPR006073 GTP-bd 120 240
IPR032859 KH_dom-like 507 586
No external refs found!