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  5. AT5G39510

AT5G39510 (SGR4, ZIG1, VTI1A,...)


Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A

Description : Vesicle transport v-SNARE family protein


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39510
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Adi_g008512 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aob_g21811 VTI12, VTI1B, ATVTI12 Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g25830 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001214 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.06G059500.1 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cre13.g577500 VTI12, VTI1B, ATVTI12 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Dcu_g25235 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Lfl_g21752 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pp3c17_17260V3.1 SGR4, ZIG1,... Vesicle transport v-SNARE family protein 0.01 OrthoFinder output from all 47 species
Zm00001e020013_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Zm00001e027750_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.02 OrthoFinder output from all 47 species
Zm00001e028148_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IDA Interproscan
BP GO:0000902 cell morphogenesis RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005770 late endosome IDA Interproscan
CC GO:0005770 late endosome TAS Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
CC GO:0005802 trans-Golgi network TAS Interproscan
BP GO:0006605 protein targeting RCA Interproscan
BP GO:0006623 protein targeting to vacuole IMP Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0006896 Golgi to vacuole transport IGI Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
BP GO:0009630 gravitropism IMP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0016197 endosomal transport RCA Interproscan
CC GO:0030140 trans-Golgi network transport vesicle IDA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000060 obsolete protein import into nucleus, translocation IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
CC GO:0000815 ESCRT III complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!