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  5. AT5G36200

AT5G36200


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G36200

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G32140 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.06 OrthoFinder output from all 47 species
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT2G04920 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT2G11200 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT2G39355 No alias No description available 0.04 OrthoFinder output from all 47 species
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT3G16020 No alias F-box associated ubiquitination effector protein 0.02 OrthoFinder output from all 47 species
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G17500 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G18120 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G18330 No alias F-box family protein 0.1 OrthoFinder output from all 47 species
AT3G19560 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G19890 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT3G20710 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT3G22710 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G44120 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.12 OrthoFinder output from all 47 species
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 215 384
IPR001810 F-box_dom 3 46
No external refs found!