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  5. AT5G35610

AT5G35610


Description : Paired amphipathic helix (PAH2) superfamily protein


Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G35610
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G10250 No alias BEST Arabidopsis thaliana protein match is: SIN3-like 6... 0.04 OrthoFinder output from all 47 species
AT1G23810 No alias Paired amphipathic helix (PAH2) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G24200 No alias Paired amphipathic helix (PAH2) superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G24220 No alias paired amphipathic helix repeat-containing protein 0.05 OrthoFinder output from all 47 species
AT1G24230 No alias Paired amphipathic helix (PAH2) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G24250 No alias Paired amphipathic helix (PAH2) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G27240 No alias Paired amphipathic helix (PAH2) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G27250 No alias Paired amphipathic helix (PAH2) superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G27260 No alias Paired amphipathic helix (PAH2) superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G27280 No alias Paired amphipathic helix (PAH2) superfamily protein 0.03 OrthoFinder output from all 47 species
Solyc02g087365.1.1 SNL2, Solyc02g087365 Paired amphipathic helix protein Sin3-like 3... 0.03 OrthoFinder output from all 47 species
Solyc02g087373.1.1 SNL2, Solyc02g087373 Paired amphipathic helix protein Sin3-like 3... 0.04 OrthoFinder output from all 47 species
Solyc02g087377.1.1 SNL2, Solyc02g087377 Paired amphipathic helix protein Sin3-like 3... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR003822 PAH 27 71
No external refs found!