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  5. AT5G35520

AT5G35520 (ATMIS12, MIS12)


Aliases : ATMIS12, MIS12

Description : minichromosome instability 12 (mis12)-like


Gene families : OG0008719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G35520

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008195001 ATMIS12, MIS12 Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IDA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000338 protein deneddylation IEP HCCA
MF GO:0004161 dimethylallyltranstransferase activity IEP HCCA
MF GO:0004337 geranyltranstransferase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010387 COP9 signalosome assembly IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033477 S-methylmethionine metabolic process IEP HCCA
BP GO:0033528 S-methylmethionine cycle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR008685 Centromere_Mis12 11 139
No external refs found!