AT5G28540 (BIP1)

Aliases : BIP1

Description : heat shock protein 70 (Hsp 70) family protein

Gene families : OG0000109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G28540

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00264000	BIP, BIP2,...	External stimuli response.temperature.Hsp...	0.11	OrthoFinder output from all 47 species
AT5G02500	AT-HSC70-1,...	heat shock cognate protein 70-1	0.04	OrthoFinder output from all 47 species
Adi_g058796	ATHSP70, HSP70	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09945	BIP, BIP2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g11050	BIP, BIP2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g19177	BIP1	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Als_g39943	AT-HSC70-1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g51602	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g56874	ATHSP70, HSP70	chaperone *(Hsp70) & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g03397	BIP, BIP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21618	BIP1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g07659	ATHSP70, HSP70	chaperone *(Hsp70) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.11G050300.1	ATHSP70, HSP70,...	chaperone *(Hsp70) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.15G052600.1	BIP1, Ceric.15G052600	not classified & original description: pacid=50640800...	0.04	OrthoFinder output from all 47 species
Ceric.32G054900.1	BIP, BIP2,...	not classified & original description: pacid=50598653...	0.09	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000241.33	BIP, BIP2	External stimuli response.temperature.Hsp...	0.06	OrthoFinder output from all 47 species
Cre02.g080600	BIP, BIP2	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Cre08.g372100	ATHSP70, HSP70	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Dac_g09215	ATHSP70, HSP70	chaperone *(Hsp70) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g01715	BIP, BIP2	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Ehy_g11948	Hsp70b	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019607001	BIP, BIP2	External stimuli response.temperature.Hsp...	0.15	OrthoFinder output from all 47 species
GSVIVT01038580001	BIP, BIP2	External stimuli response.temperature.Hsp...	0.17	OrthoFinder output from all 47 species
Gb_17859	BIP1	Luminal-binding protein 4 OS=Nicotiana tabacum...	0.04	OrthoFinder output from all 47 species
Gb_19863	BIP, BIP2	Luminal-binding protein OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
LOC_Os02g02410.1	BIP, BIP2, LOC_Os02g02410	Heat shock 70 kDa protein BIP1 OS=Oryza sativa subsp....	0.1	OrthoFinder output from all 47 species
Lfl_g23161	ATHSP70, HSP70	chaperone *(Hsp70) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g39019	BIP1	not classified & original description: none	0.08	OrthoFinder output from all 47 species
MA_5353g0010	BIP1	Luminal-binding protein OS=Solanum lycopersicum...	0.1	OrthoFinder output from all 47 species
Mp2g04890.1	BIP, BIP2	Luminal-binding protein 4 OS=Nicotiana tabacum...	0.1	OrthoFinder output from all 47 species
Msp_g29386	AT-HSC70-1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g36514	BIP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g13945	BIP1	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Pir_g47327	BIP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c3_26570V3.1	Pp3c3_26570	heat shock cognate protein 70-1	0.04	OrthoFinder output from all 47 species
Smo104343	AT-HSC70-1,...	Probable mediator of RNA polymerase II transcription...	0.04	OrthoFinder output from all 47 species
Smo440900	BIP1	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Smo443120	AT-HSC70-1,...	External stimuli response.temperature.Hsp...	0.09	OrthoFinder output from all 47 species
Smo446858	AT-HSC70-1,...	External stimuli response.temperature.Hsp...	0.08	OrthoFinder output from all 47 species
Solyc03g082920.4.1	BIP, BIP2, Solyc03g082920	Luminal-binding protein 5 OS=Nicotiana tabacum...	0.11	OrthoFinder output from all 47 species
Solyc08g082820.4.1	BIP1, Solyc08g082820	Luminal-binding protein OS=Solanum lycopersicum...	0.16	OrthoFinder output from all 47 species
Solyc11g066060.3.1	ATHSP70, HSP70,...	chaperone (Hsp70)	0.09	OrthoFinder output from all 47 species
Spa_g02575	BIP1	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Spa_g08040	ATHSP70, HSP70	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g12193	BIP1	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Spa_g14807	ATHSP70, HSP70	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24022	AT-HSC70-1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g49584	BIP, BIP2	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Spa_g50211	ERD2, HSP70T-1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g50212	BIP1	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Spa_g55275	AT-HSC70-1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55768	AT-HSC70-1,...	chaperone *(Hsp70) & original description: none	0.08	OrthoFinder output from all 47 species
Zm00001e013457_P002	BIP, BIP2, Zm00001e013457	Luminal-binding protein 2 OS=Zea mays...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005788	endoplasmic reticulum lumen	TAS	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006457	protein folding	ISS	Interproscan
BP	GO:0006457	protein folding	TAS	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEP	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010197	polar nucleus fusion	IGI	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016592	mediator complex	IDA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IMP	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	None	Extended
BP	GO:0036503	ERAD pathway	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
MF	GO:0003756	protein disulfide isomerase activity	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0006984	ER-nucleus signaling pathway	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0052033	obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013126	Hsp_70_fam	37	644

External Links

No external refs found!

AT5G28540 (BIP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation