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  5. AT5G27930

AT5G27930


Description : Protein phosphatase 2C family protein


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G27930

Target Alias Description ECC score Gene Family Method Actions
AT5G26010 No alias Protein phosphatase 2C family protein 0.05 OrthoFinder output from all 47 species
Adi_g015304 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022167 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111376 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07935 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39177 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26108.t1 Aspi01Gene26108 clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0031.g024440 No alias clade E phosphatase & original description: CDS=386-1780 0.04 OrthoFinder output from all 47 species
Cba_g05129 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26652 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G064800.1 Ceric.19G064800 clade E phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g09330 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26040 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26120 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030261001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
LOC_Os08g39100.1 LOC_Os08g39100 clade E phosphatase 0.04 OrthoFinder output from all 47 species
Lfl_g39635 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03382 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12111 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17125 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08564 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13376 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35386 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37953 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g008490.3.1 Solyc10g008490 clade E phosphatase 0.03 OrthoFinder output from all 47 species
Spa_g50856 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14598 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024356_P001 Zm00001e024356 clade E phosphatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004722 protein serine/threonine phosphatase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000060 obsolete protein import into nucleus, translocation IEP HCCA
CC GO:0000785 chromatin IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010077 maintenance of inflorescence meristem identity IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 87 333
No external refs found!