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  5. AT5G25460

AT5G25460


Description : Protein of unknown function, DUF642


Gene families : OG0003264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25460

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00264p00012960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Cba_g55088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033286001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_14930 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g42520.1 LOC_Os01g42520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g55190.1 LOC_Os01g55190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g59300.1 LOC_Os03g59300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41740.1 LOC_Os04g41740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g04050.1 LOC_Os07g04050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434741g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_201516g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_251322g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_54830g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g120040.3.1 Solyc03g120040 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g067910.3.1 Solyc06g067910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g067030.3.1 Solyc08g067030 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e007711_P001 Zm00001e007711 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007713_P001 Zm00001e007713 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007714_P001 Zm00001e007714 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013973_P001 Zm00001e013973 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e020676_P001 Zm00001e020676 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0010015 root morphogenesis IMP Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
InterPro domains Description Start Stop
IPR006946 DGR2-like_dom 29 184
IPR006946 DGR2-like_dom 197 363
No external refs found!