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  5. AT5G21050

AT5G21050


Description : LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64090.1); Has 206 Blast hits to 206 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).


Gene families : OG0003394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G21050
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Aev_g18161 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species
Ala_g08555 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13381.t1 Aspi01Gene13381 component *(HYC) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species
Dac_g14189 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.06 OrthoFinder output from all 47 species
GSVIVT01037470001 No alias No description available 0.04 OrthoFinder output from all 47 species
Ore_g15503 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.03 OrthoFinder output from all 47 species
Pir_g17687 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR018619 Hyccin 58 330
No external refs found!