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  5. AT5G20950

AT5G20950


Description : Glycosyl hydrolase family protein


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20950

Target Alias Description ECC score Gene Family Method Actions
Aop_g10747 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037542001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Ore_g05025 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59342 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g071640.3.1 Solyc11g071640 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 409 618
IPR001764 Glyco_hydro_3_N 45 372
No external refs found!