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  5. AT5G18970

AT5G18970


Description : AWPM-19-like family protein


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G18970
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.13 OrthoFinder output from all 47 species
AMTR_s00039p00166770 evm_27.TU.AmTr_v1... Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00976.t1 Aspi01Gene00976 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000342 No alias not classified & original description: CDS=215-733 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.03 OrthoFinder output from all 47 species
Ceric.19G032900.1 Ceric.19G032900 not classified & original description: pacid=50575324... 0.03 OrthoFinder output from all 47 species
Ceric.27G060800.1 Ceric.27G060800 not classified & original description: pacid=50605763... 0.02 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.07 OrthoFinder output from all 47 species
Ceric.37G004800.1 Ceric.37G004800 not classified & original description: pacid=50615541... 0.03 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.05 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.06 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.07 OrthoFinder output from all 47 species
Dac_g01968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40048 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g45978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017867001 No alias No description available 0.22 OrthoFinder output from all 47 species
GSVIVT01021373001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Gb_30286 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_35398 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g50440.1 LOC_Os01g50440 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g03103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.09 OrthoFinder output from all 47 species
MA_16601g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_199g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_812511g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g01539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_14380V3.1 Pp3c1_14380 AWPM-19-like family protein 0.01 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022956 No alias not classified & original description: CDS=1-318 0.03 OrthoFinder output from all 47 species
Sam_g06806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo437726 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.15 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g09783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016338_P001 Zm00001e016338 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e020052_P001 Zm00001e020052 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Zm00001e026824_P001 Zm00001e026824 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.16 OrthoFinder output from all 47 species
Zm00001e028127_P001 Zm00001e028127 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004816 asparagine-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009820 alkaloid metabolic process IEP HCCA
BP GO:0009821 alkaloid biosynthetic process IEP HCCA
MF GO:0016688 L-ascorbate peroxidase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 155
No external refs found!