AT5G17330 (GAD, GAD1)

Aliases : GAD, GAD1

Description : glutamate decarboxylase

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G17330

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00142920	GAD, GAD1,...	Amino acid metabolism.biosynthesis.glutamate...	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00144920	GAD5,...	Glutamate decarboxylase 5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00145270	GAD, GAD1,...	Amino acid metabolism.biosynthesis.glutamate...	0.04	OrthoFinder output from all 47 species
Adi_g038079	GAD4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g040720	GAD2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01082	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g18805	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38116	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g63120	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene40638.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.25G021000.1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g03311	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g01418	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g10779	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g11785	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g35431	GAD5	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011564001	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.06	OrthoFinder output from all 47 species
LOC_Os03g13300.1	GAD, GAD1, LOC_Os03g13300	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
LOC_Os03g51080.1	GAD, GAD1, LOC_Os03g51080	glutamate decarboxylase	0.05	OrthoFinder output from all 47 species
LOC_Os04g37460.1	GAD, GAD1, LOC_Os04g37460	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os08g36320.1	GAD, GAD1, LOC_Os08g36320	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Len_g20416	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g20287	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
MA_65512g0010	GAD3	Glutamate decarboxylase OS=Petunia hybrida...	0.05	OrthoFinder output from all 47 species
MA_89828g0010	GAD, GAD1	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
Mp3g23860.1	GAD, GAD1	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Nbi_g09361	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06503	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g45178	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17072	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30214	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007078	GAD2	glutamate decarboxylase *(GAD) & original description:...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020087	GAD4	glutamate decarboxylase *(GAD) & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g17193	No alias	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g005000.3.1	GAD4, Solyc01g005000	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc04g025530.3.1	GAD4, Solyc04g025530	glutamate decarboxylase	0.06	OrthoFinder output from all 47 species
Solyc05g054050.4.1	GAD, GAD1, Solyc05g054050	glutamate decarboxylase	0.06	OrthoFinder output from all 47 species
Spa_g05104	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g12089	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g12090	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g17654	GAD2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55008	GAD2	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004351	glutamate decarboxylase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	IDA	Interproscan
MF	GO:0005516	calmodulin binding	IEP	Interproscan
MF	GO:0005516	calmodulin binding	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010359	regulation of anion channel activity	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0022898	regulation of transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0032409	regulation of transporter activity	None	Extended
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	None	Extended
BP	GO:0044070	regulation of monoatomic anion transport	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004040	amidase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004520	endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0004738	pyruvate dehydrogenase activity	IEP	HCCA
MF	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005884	actin filament	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	33	381

External Links

No external refs found!

AT5G17330 (GAD, GAD1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation