Description : Adenosylmethionine decarboxylase family protein
Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G15950 | |
Cluster | HCCA: Cluster_78 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00164800 | evm_27.TU.AmTr_v1... | Polyamine metabolism.putrescine.synthesis.cytosolic... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00025p00139140 | SAMDC4, BUD2,... | Polyamine... | 0.04 | OrthoFinder output from all 47 species | |
Als_g10247 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g38176 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0002.g001379 | SAMDC | EC_4.1 carbon-carbon lyase & original description: CDS=1-2412 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g07410 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cre03.g205900 | SAMDC | Polyamine... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g683371 | No alias | Polyamine metabolism.putrescine.synthesis.cytosolic... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g13674 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g40367 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041156_P001 | Zm00001e041156 | S-adenosyl methionine decarboxylase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004014 | adenosylmethionine decarboxylase activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0009744 | response to sucrose | RCA | Interproscan |
BP | GO:0009813 | flavonoid biosynthetic process | RCA | Interproscan |
BP | GO:0010224 | response to UV-B | RCA | Interproscan |
BP | GO:0010264 | myo-inositol hexakisphosphate biosynthetic process | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009637 | response to blue light | IEP | HCCA |
BP | GO:0009785 | blue light signaling pathway | IEP | HCCA |
BP | GO:0009806 | lignan metabolic process | IEP | HCCA |
BP | GO:0009807 | lignan biosynthetic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010017 | red or far-red light signaling pathway | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0030522 | intracellular receptor signaling pathway | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0071478 | cellular response to radiation | IEP | HCCA |
BP | GO:0071482 | cellular response to light stimulus | IEP | HCCA |
BP | GO:0071483 | cellular response to blue light | IEP | HCCA |
BP | GO:0071489 | cellular response to red or far red light | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001985 | S-AdoMet_decarboxylase | 7 | 332 |
No external refs found! |