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  5. AT5G14900

AT5G14900


Description : helicase associated (HA2) domain-containing protein


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G14900
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Aop_g35974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27639.t1 Aspi01Gene27639 RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.03 OrthoFinder output from all 47 species
Gb_30670 No alias helicase Prp43 of Intron-Lariat Spliceosome complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g32370.1 ESP3, EMB2733,... RNA helicase (Prp2) 0.05 OrthoFinder output from all 47 species
LOC_Os06g23530.1 LOC_Os06g23530 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 OrthoFinder output from all 47 species
Ore_g10443 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009152 No alias not classified & original description: CDS=1-849 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009162 No alias not classified & original description: CDS=1-849 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025850 ESP3, EMB2733 not classified & original description: CDS=1-522 0.01 OrthoFinder output from all 47 species
Solyc12g017700.2.1 ESP3, EMB2733,... RNA helicase (Prp2) 0.05 OrthoFinder output from all 47 species
Zm00001e003642_P002 Zm00001e003642 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019433 triglyceride catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0046461 neutral lipid catabolic process IEP HCCA
BP GO:0046464 acylglycerol catabolic process IEP HCCA
BP GO:0046503 glycerolipid catabolic process IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 36 125
IPR011709 DEAD-box_helicase_OB_fold 187 265
No external refs found!