Heatmap: Cluster_71 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
3.64 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.25 4.82 - - - - - - - 1.33
- -4.53 - - -1.84 - - - -1.57 - - - - 5.09 - -2.15 - - - - - - - - - - - - 1.12 - - -1.17 - 0.01 -5.07 - 1.57 -2.74 -1.53 - - - - 2.02 0.43 - -3.78 -1.23
-2.54 - 0.57 -1.38 -0.98 0.49 -1.34 - - - - - - - - - - - -0.86 -4.35 - - - -6.89 - - - - -2.72 -1.16 - 1.48 -2.22 0.54 - -1.38 - -3.25 -5.16 1.8 - 4.38 3.03 - 2.17 - - -0.9
2.85 1.06 2.5 1.93 2.28 1.28 2.23 -3.88 -5.26 -3.72 -4.95 - - -1.57 -2.83 -0.84 -1.04 -1.92 -2.21 0.3 -0.35 -0.54 -0.63 -0.25 -3.42 -0.68 -1.67 -0.47 -1.22 -3.71 -0.23 -0.45 -2.26 0.35 -1.26 0.03 -0.12 -0.88 -0.83 - -3.9 -0.74 -1.02 -1.06 -1.65 - - -2.53
1.46 -1.21 -5.36 -5.32 -2.18 0.3 -3.67 -4.06 - -5.7 -5.77 - -2.24 -4.07 -1.66 0.06 3.74 1.18 -1.63 1.36 -4.18 -2.31 -2.59 -0.49 -2.16 -1.2 -2.38 -0.55 -1.93 -3.74 -1.89 -1.0 -2.94 -1.09 -4.26 0.22 -4.75 -1.45 -4.25 - 0.16 2.2 1.84 -1.94 1.63 -4.89 1.21 0.95
2.42 -2.45 - -1.19 - -5.08 - - - - -4.64 - -1.59 3.94 0.56 -0.53 -2.4 0.36 -4.63 -0.18 0.56 -1.71 -1.57 -1.52 - -4.1 -4.72 -3.48 -5.26 - - -2.38 -2.7 -2.38 -3.36 1.33 3.47 1.69 -0.79 -0.65 - -2.01 - - -2.51 - - -
2.25 -1.2 -1.54 - 0.1 - 0.23 0.4 -0.29 -1.08 1.27 - 4.44 -1.9 -0.61 -1.8 -6.62 -1.7 -1.56 -1.01 - - -1.73 -1.36 - -0.84 - -0.35 -0.95 1.15 -2.39 -3.73 -2.15 -0.59 -3.18 - - -2.21 -2.54 -1.14 - -0.8 - -0.71 -1.89 1.3 -1.9 -
-5.12 -2.75 -4.24 -3.95 -1.44 1.85 - -2.89 - - - - - -4.75 - -1.27 -1.16 -3.43 -5.66 -1.35 - -3.99 -3.01 -0.34 - -0.26 - -3.92 -0.71 - -1.28 0.8 -2.64 0.9 - -4.04 - -2.73 -3.09 - - 3.4 2.02 - 4.34 - - -1.43
AT2G02310 (PP2-B6)
0.6 -5.95 - -1.16 - - -2.16 -1.76 - -2.08 -1.82 2.51 -0.44 - - -3.49 -2.33 - - - - - - -2.23 - -3.39 -2.12 - -2.68 - - -3.94 -3.19 1.41 -6.53 1.66 2.46 -1.75 -1.67 1.85 - 3.07 0.84 - 3.54 - - -
1.77 -1.43 - - - - - - - - - - 2.75 -2.04 -1.71 -0.7 -1.21 -2.07 -4.97 0.53 - -1.49 -1.09 1.0 -2.45 0.45 -2.36 -2.93 -4.99 - -2.95 -7.79 -3.92 -3.6 -2.15 3.73 2.7 -1.56 1.51 -2.61 -1.48 -0.91 -3.3 -4.69 -0.63 -1.13 1.89 -4.89
- - - 2.86 - - - - - - - - - - - - - - - - - - - - - - - - 3.19 - - - - - - - 4.83 -0.64 1.34 - - - - - - - - -
2.75 - - - - - - - - - - -4.2 - - - - -2.15 - - -3.44 - - - -3.36 - -3.18 - - -2.45 - - - - - - 4.11 4.47 -2.82 0.05 - - - - - - - - -
AT2G21900 (WRKY59)
- -2.77 - - - - - - - - - 1.18 -0.73 - - -1.06 - - - -3.37 - - - - - -1.12 - - 0.66 - - 2.06 - 4.27 - - 1.66 1.56 -0.75 - - 1.96 - - 3.06 - - -
1.27 -1.98 - -2.32 -1.7 -5.81 - -5.58 - - - - - -3.48 -0.68 -2.82 - -4.79 -5.52 0.25 1.26 -3.84 - 0.31 -0.49 -0.38 2.47 - -6.51 -5.18 -2.7 -3.66 - -1.88 -6.9 0.48 3.99 -2.69 0.46 2.5 1.69 1.39 - - -1.08 -0.74 - -6.43
-1.75 -2.47 -0.48 0.13 -0.69 - -1.39 - - - - - 0.72 2.9 - - - - -2.97 -4.91 - - - 1.6 - -1.5 - - 3.15 - 4.5 - - - - -1.42 - -3.3 -5.29 - - - - - - - - -
0.32 0.27 -2.34 -1.1 -0.86 -3.37 -0.43 - - - - - - 3.11 -1.02 - - -1.82 -1.66 -0.82 - 1.74 -0.07 0.64 -0.89 -0.78 0.41 -1.97 -4.35 -1.61 -0.03 -4.63 -2.81 -1.15 0.65 2.8 1.81 0.87 -2.13 -2.9 - 0.72 -2.01 -0.83 0.58 - 2.07 -1.87
0.56 -2.52 - - - - - - - - - - - 3.08 2.31 - - - - 0.77 - 0.81 2.9 1.18 - - 1.12 - - - -0.28 - -0.59 -0.99 1.14 2.84 1.36 1.66 -1.06 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.47 - - - - - - - - - 1.48 - 2.83 -1.51 - - - - - - - - - -4.98 - - 1.65 - -0.75 - - - - 1.79 - - - -2.5 -0.7 - 3.51 - - - - 1.95 1.43 -0.61
0.25 - - 0.75 - - - - - - - - - -1.49 - - - - - -3.83 - - - - - - - - -1.62 - - - - - -1.59 - 5.19 -3.3 -3.07 2.28 - 0.76 - - -0.16 - - -
1.71 -2.88 - -4.73 -4.96 -2.31 - - - -9.59 - - - -1.65 -2.19 0.45 -1.39 -1.35 -1.75 -0.3 -4.94 -2.09 -2.18 0.87 -2.25 0.87 0.72 -3.86 -0.37 -5.71 -4.7 -3.93 -3.6 -2.58 -7.58 2.65 3.92 -0.58 1.65 -1.43 - 1.71 -0.43 -7.4 -1.81 - 1.76 -4.98
- - - - - - - - - - - - - - - - - 3.11 - - - - - -0.35 - - 3.45 - - - - - - 1.52 - - - 2.94 2.13 - - - - - 3.67 - - -
1.38 -6.65 - - -6.04 - - - - - -7.49 - -4.57 -1.21 - -5.58 -5.52 -4.83 -8.04 -6.31 - -7.87 -5.82 -4.43 -5.74 -4.41 -3.51 - - - -8.81 -2.65 -3.66 -2.04 -11.88 -4.44 -2.65 -3.74 -1.97 2.04 4.93 1.62 0.25 -1.48 0.09 -3.02 1.03 0.06
-0.31 -6.53 - 3.07 -1.61 -2.99 3.41 -4.76 -1.2 -3.0 -1.97 2.69 1.66 -0.57 -2.16 -4.26 - - -2.62 -4.37 - - - -5.06 - -6.31 0.99 - 0.97 - -4.56 0.89 -2.15 0.62 -2.7 1.04 1.22 1.01 0.19 - -1.71 - - -3.5 - -1.69 -6.76 -
1.72 0.42 - -5.4 -3.29 - -5.76 - - - - - - -1.05 -1.0 2.75 0.52 -0.81 -1.46 2.67 -2.52 1.91 1.29 2.9 -5.66 2.28 -3.52 -0.32 0.36 -7.19 0.69 -7.59 -2.83 -5.27 -4.89 1.31 -3.88 -1.37 -2.79 -2.05 - - -5.3 - - - -0.39 -
0.76 0.97 0.6 0.89 0.95 0.28 0.64 -0.66 -1.12 -2.14 -1.23 -4.45 -1.54 -0.48 0.18 0.24 -0.94 -2.07 -0.95 0.35 -1.52 0.77 0.99 -0.47 -1.34 -0.54 -0.03 -0.12 2.76 -0.17 0.06 -0.6 -0.99 -0.62 -0.35 -2.13 -1.21 -0.4 -0.34 0.89 -0.29 -1.23 -0.67 0.06 -1.59 0.45 -6.13 -0.31
-1.27 -0.64 -2.6 -1.42 -0.29 1.53 0.42 0.14 -2.11 -4.38 -4.92 - 0.5 -1.8 -1.41 -2.14 -0.93 -1.03 -1.42 -0.3 -4.34 -1.94 -1.12 0.42 -1.75 -0.89 -0.63 -0.89 0.76 -1.99 -0.49 1.13 -1.86 0.17 -1.92 -0.79 -4.5 -1.35 -2.39 -1.09 -3.08 3.17 2.5 -0.56 2.34 -2.97 -0.74 0.9
AT3G46090 (ZAT7)
3.34 -3.81 -3.38 -3.43 -1.23 -0.64 -5.83 -5.98 - -5.38 - -4.07 - -2.06 -4.39 1.77 -3.6 -3.57 -3.95 -2.18 -5.82 -3.05 -2.27 0.49 -2.45 0.78 -0.6 -2.02 2.49 -3.17 -2.88 -5.63 -1.64 -2.84 -5.35 1.63 2.78 -0.22 2.26 -1.18 - -1.29 -4.38 - -1.38 - 2.14 -
-4.75 -2.63 - - - - - - - -5.4 - -2.58 - -0.63 1.72 -2.21 - - -3.45 -2.49 -1.71 - - -2.94 - -4.18 -0.27 -2.56 4.18 - -0.67 -3.1 -0.92 0.59 -1.85 - -3.56 -1.02 -1.7 - - 2.08 0.41 -1.42 1.0 - 2.47 2.63
-2.02 -2.45 - - - - - - - - - - - -2.89 -0.53 -3.31 2.56 - - -2.06 - -2.13 -3.11 0.57 -1.86 -1.45 - -2.06 1.68 - 0.0 1.89 -0.95 2.37 -3.55 1.28 - 1.3 -2.83 - 1.7 2.58 2.39 - 1.15 - - 1.26
-2.16 -5.05 -1.97 -3.8 -2.62 - -1.94 - - - -3.83 - - -1.59 1.45 - -0.94 -3.25 - -3.28 - -2.46 -3.72 -3.78 -4.2 -4.24 -3.92 -2.67 -1.35 - -4.29 1.22 1.06 2.97 -6.0 -2.79 -1.07 -2.27 -2.97 - -2.61 2.34 2.18 3.22 2.74 - - 1.61
AT4G25810 (XTR6)
0.46 -4.07 -5.91 - -5.25 -6.42 - - - - - - -3.68 3.35 -3.55 -0.75 -4.19 -2.48 -2.26 -1.46 -8.3 -5.45 -5.11 1.02 -1.63 0.25 1.02 -2.36 -0.16 -5.94 -3.05 0.1 -0.01 2.57 -5.54 1.34 1.49 0.19 0.98 -1.56 -2.61 2.86 0.9 -4.46 0.67 - -7.68 -2.53
-0.28 -4.61 -1.37 -2.08 -1.09 1.82 - -1.12 -1.39 - - -2.42 - 3.97 -1.1 - - - - - - - - -4.23 1.16 - - - 1.25 0.05 -4.78 - - -0.3 - - - -2.4 3.41 0.48 0.25 2.41 - - - - - -3.31
AT4G30280 (XTH18)
-1.28 -7.05 -8.67 - -4.74 -4.23 - -8.01 - -8.81 - - -4.08 -1.66 -7.98 -3.52 -4.63 -5.19 -7.12 -4.07 -10.41 -6.0 -7.65 -1.85 -4.46 -2.06 -1.09 -1.27 -2.49 -9.82 -7.07 -0.42 -0.91 3.15 -7.17 1.71 0.83 -0.98 -1.16 1.59 -2.8 2.9 3.3 -5.05 2.69 -5.52 -0.53 0.47
0.14 -2.22 -0.24 -1.64 -0.87 -1.41 - - - - - - - 0.29 -0.54 -0.92 -2.69 - -2.94 0.05 - -0.51 -0.24 -0.93 -0.61 -0.88 -0.98 0.5 -3.96 -1.22 -3.11 0.46 0.95 1.16 -0.67 -0.61 3.44 0.58 2.5 1.61 - 1.84 0.27 - 1.18 - - -3.75
AT4G38420 (sks9)
1.1 -5.17 - - -7.52 -6.6 - - - -11.14 - - - -2.47 -1.67 0.17 -7.01 -3.16 -1.29 -5.95 -2.01 -1.39 -6.33 -1.69 -3.98 -1.39 -0.04 -2.61 -1.26 -8.71 -9.42 -1.42 0.47 0.57 -7.61 -0.94 -2.13 -1.45 0.1 0.48 5.02 -1.65 -2.37 - -1.22 -5.49 - -1.51
-2.13 0.29 0.25 1.4 1.78 - 1.3 - - - - - - 0.79 - -2.41 - - - 1.07 - - - -1.94 - -2.53 - - - - 1.74 -0.74 1.82 -1.37 -1.28 2.07 1.41 2.88 0.63 -1.35 - 0.61 - 2.28 -1.31 - -3.95 0.15
-0.61 2.82 - - - -2.52 -2.01 - - -2.01 -2.1 - -1.31 -1.28 - - - - -3.57 -1.66 - - - - - - - -0.35 4.08 - - -2.74 -3.27 -2.17 -3.86 - -1.94 0.84 -2.76 - - 0.94 1.83 2.2 -0.38 2.7 -3.9 -2.17
1.11 -5.36 2.88 3.11 2.69 1.17 3.0 -0.4 -1.84 -2.16 -1.34 0.19 -0.65 -3.33 -2.34 -1.08 -3.26 -5.87 -0.52 -2.16 - -2.19 -3.36 -1.07 -5.68 -1.21 -3.35 -3.29 1.1 -7.27 -4.71 -3.98 -3.89 -6.18 -7.62 -1.32 1.49 -1.91 -1.88 - - -1.41 - - - - -8.04 -
-1.12 -1.93 0.22 0.26 - -1.21 0.12 2.31 - -0.64 - - - -1.08 - - - - - -1.45 -1.09 - - -0.81 - - - - - - -2.17 0.78 -1.84 -2.5 -1.52 -0.72 0.38 -2.72 0.02 - - - -0.64 - - 4.87 -5.6 -1.86
0.17 - 2.02 - 1.88 - - -1.51 - -1.34 - - - -3.03 - - -0.03 - -1.09 -2.8 - - - - - - - -0.88 2.18 1.38 -2.52 1.46 -1.26 -0.97 -4.98 -0.0 -1.17 -4.32 - -0.96 - 3.81 -0.91 - 3.09 - -5.87 -
2.62 -3.85 2.48 2.33 3.26 3.24 2.4 0.42 -0.27 -3.08 -1.78 - - - -1.67 - - - -4.68 -3.51 - - - -4.0 -1.0 -4.78 - - 0.12 0.64 -3.26 -4.74 - - -5.63 - - -5.76 -3.09 -1.7 - - - - - - - -
- -5.67 - - -4.23 - - - - - - - - -5.24 - - - - -5.38 -6.3 - - - -8.28 - - -2.77 - - - - 0.29 -0.73 1.52 - - - -2.34 -3.97 - - 4.84 2.54 -3.1 2.98 - - -1.36
1.4 -7.11 -6.06 -4.77 -2.4 -5.24 - -4.79 - - - - -5.56 -3.01 - - - - - -2.54 - - - -2.06 - -2.6 - -0.35 2.64 -6.63 -7.47 0.91 -1.47 1.16 - 3.0 -1.24 -0.87 -1.6 -2.21 - 3.69 2.58 -3.18 1.82 - - -0.38
- -3.7 - -2.51 -0.62 -0.03 - 0.64 -2.97 1.39 - -0.69 5.21 - -0.53 -3.52 - - - - - -2.55 - -8.11 - - - - -1.43 -2.81 - - -4.66 -3.74 -5.01 - - -3.72 1.03 -2.41 - - -2.51 - - - - -
AT5G43650 (BHLH92)
1.12 -5.34 - -2.81 -4.98 - - - - - - - - -3.77 -1.13 -2.27 -3.51 - -1.65 -2.24 -0.25 -2.46 -5.39 -0.35 -0.65 -1.33 3.43 - -2.19 -5.16 - -6.27 -4.62 -5.14 -6.86 1.9 4.36 -2.95 1.62 0.14 -1.14 -0.29 -4.29 - -1.83 -3.95 -3.57 -6.47
-0.62 - -3.91 -3.46 -3.04 - - - - - - - - - -2.36 -3.56 - - - -5.72 - - - - -3.7 -5.51 - - -0.21 - - 0.73 -1.36 0.65 - - - -5.34 - - - 4.72 2.53 - 2.92 -0.42 - 0.72
2.03 0.26 1.84 2.4 1.06 -1.39 2.09 -6.14 -9.11 -5.6 -4.37 - -2.71 -1.91 -2.23 -1.27 -0.75 -1.68 0.3 2.19 -4.12 -1.08 0.36 0.98 -4.55 0.7 -3.03 -0.5 1.46 -6.93 0.9 -6.05 -3.25 -2.84 -4.39 1.36 1.71 -2.58 0.67 -3.27 -4.81 -2.57 -5.36 -7.09 -3.06 -5.53 - -8.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.