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  5. AT5G12460

AT5G12460


Description : Protein of unknown function (DUF604)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12460

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00258400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g025737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20843.t1 Aspi01Gene20843 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59505.t1 Aspi01Gene59505 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015970 No alias not classified & original description: CDS=592-2169 0.02 OrthoFinder output from all 47 species
Cba_g03262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024903001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01025084001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030630001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01034119001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_04629 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_36870 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39622 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g45700.1 LOC_Os02g45700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g03270.1 LOC_Os03g03270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g16334.1 LOC_Os03g16334 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431764g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_12294g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_66888g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_89971g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_93259g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo63103 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g006770.2.1 Solyc01g006770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g075560.2.1 Solyc06g075560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g052650.2.1 Solyc07g052650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g081420.4.1 Solyc08g081420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g065390.3.1 Solyc11g065390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g065400.2.1 Solyc11g065400 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g065440.3.1 Solyc11g065440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g065480.3.1 Solyc11g065480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g056200.2.1 Solyc12g056200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g099680.1.1 Solyc12g099680 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc12g099690.1.1 Solyc12g099690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g099730.3.1 Solyc12g099730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g12649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041410_P001 Zm00001e041410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008115 sarcosine oxidase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
CC GO:0016602 CCAAT-binding factor complex IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0033356 UDP-L-arabinose metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048468 cell development IEP HCCA
MF GO:0052691 UDP-arabinopyranose mutase activity IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 167 409
No external refs found!