Description : CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene families : OG0020070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020070_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G10210 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00060p00183840 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g078620.1.1 | Solyc03g078620 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g055130.1.1 | Solyc04g055130 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Solyc04g055140.1.1 | Solyc04g055140 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g055150.1.1 | Solyc04g055150 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009723 | response to ethylene | IEP | HCCA |
BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | HCCA |
BP | GO:0009740 | gibberellic acid mediated signaling pathway | IEP | HCCA |
BP | GO:0009751 | response to salicylic acid | IEP | HCCA |
BP | GO:0009753 | response to jasmonic acid | IEP | HCCA |
BP | GO:0009888 | tissue development | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010026 | trichome differentiation | IEP | HCCA |
BP | GO:0010087 | phloem or xylem histogenesis | IEP | HCCA |
BP | GO:0010089 | xylem development | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010476 | gibberellin mediated signaling pathway | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0040034 | regulation of development, heterochronic | IEP | HCCA |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | HCCA |
BP | GO:0048509 | regulation of meristem development | IEP | HCCA |
BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0070542 | response to fatty acid | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |