Heatmap: Cluster_140 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G02500 (MAT1)
-0.71 0.0 -0.65 -0.47 -0.97 -1.35 -0.21 -1.92 -1.51 -3.03 -1.85 -2.9 -5.78 0.25 -0.52 -0.86 -0.46 -0.04 -1.86 -0.66 -0.66 -0.97 -0.58 0.38 -4.46 1.01 -1.08 -0.52 -1.97 -6.3 -0.5 -0.62 0.42 0.66 -0.9 0.73 -0.16 1.42 -0.17 -1.25 -1.22 2.27 1.16 0.09 1.0 2.46 0.83 0.31
-4.04 -1.15 -2.76 -6.02 -3.71 -6.4 -6.38 - - -7.74 - -6.45 -4.71 0.28 0.14 1.56 2.11 1.07 -2.9 -1.55 1.98 -0.18 0.0 0.6 -6.42 1.01 -6.14 -5.9 -5.35 -3.02 -2.61 -0.51 1.03 1.89 -0.66 1.43 0.25 1.76 1.92 - - 1.65 -1.5 -5.34 1.86 - - -
- -0.21 - -1.81 -3.89 - - - - - - - - -0.31 0.59 0.42 1.17 -0.13 -5.41 -1.6 1.52 0.4 -0.45 0.33 - 0.84 - - -3.56 -5.57 -1.51 0.64 0.52 1.61 0.43 1.6 -0.82 1.33 -1.42 - - 2.95 1.68 -0.32 2.29 - - -0.56
- -0.97 - 0.17 - - - - - - - - 0.97 - - - - - 0.23 - - - 0.06 -5.43 - -0.46 - - - - - - - -0.4 - - 2.93 4.79 - - - 1.08 0.17 - 1.17 - - -
AT1G20160 (ATSBT5.2)
-4.37 -1.81 -5.5 -6.41 -5.91 -7.41 -7.96 -10.51 -10.59 - -9.05 - - 1.11 -1.55 -1.15 -2.65 -1.04 -2.37 -2.73 -4.28 -1.48 -0.93 -0.38 -2.79 0.42 1.5 -3.88 -7.82 -7.18 -0.96 -5.23 -0.16 1.88 -2.86 0.36 4.07 1.64 0.0 -3.48 - 2.75 -2.3 -5.27 1.61 - - -6.18
AT1G43790 (TED6)
-7.53 -0.77 - - - - -7.32 - - -8.88 - - - 0.63 -0.36 1.47 2.69 1.58 -3.28 -1.72 2.13 -0.25 -0.6 0.97 -6.7 1.2 -6.49 - -3.46 -9.11 -1.73 -0.31 -0.11 1.85 -0.53 1.57 -0.9 2.17 -1.41 - - 1.52 -0.94 -6.69 2.03 - - -7.41
-3.08 2.12 -4.33 - - -4.51 - - -4.46 -4.71 - -4.08 2.54 0.62 -1.06 -2.02 0.31 -0.26 -0.51 -0.31 -3.48 - -4.15 0.83 -3.39 1.33 1.34 -3.01 -1.88 -4.3 1.65 -2.46 -1.68 1.08 -6.09 1.49 1.22 0.98 1.09 - - 0.78 2.11 -3.46 1.25 - - -0.57
-8.07 -0.65 - -4.16 - -7.26 -5.74 -5.23 -2.15 -2.82 -1.53 -0.22 -0.57 1.35 -0.25 1.76 2.78 0.24 -3.18 -2.52 1.14 -0.22 -0.37 1.34 -6.12 1.58 -2.27 -2.21 -2.41 - -0.58 -0.96 -0.04 0.85 -1.67 2.59 -2.43 1.42 -2.16 -4.05 - 1.83 -0.72 - 1.19 - - -6.9
- -0.29 - 1.18 - - -2.22 - - - - - - -1.25 0.8 -0.93 0.84 - -2.48 -2.55 - 0.08 -1.88 -0.04 - 0.17 - -1.74 -1.58 - -2.0 -0.59 0.83 1.67 -0.48 1.84 -0.25 1.41 -0.47 - - 3.66 0.81 - 2.75 - - -1.97
AT1G58370 (RXF12)
-7.17 -0.28 - - -7.87 - -5.82 - - - -6.29 -3.84 -3.96 -0.66 0.58 0.89 0.98 0.18 -2.43 -1.47 1.35 -0.98 -0.92 0.7 -7.11 1.24 -4.4 -5.08 -3.33 -6.24 -1.87 0.72 1.2 1.87 -1.37 1.94 -1.65 2.52 -1.88 -7.74 - 2.37 1.07 -4.3 2.52 - - -3.46
-4.47 -1.03 -4.72 - -6.2 - -5.97 -5.85 - - - - -6.3 1.28 1.25 0.34 1.77 0.03 -7.15 -2.0 0.25 -0.03 0.41 1.26 - 1.77 - - -5.94 -7.38 -5.06 -1.76 0.88 1.0 -1.37 3.13 0.65 2.94 -2.08 - - 0.48 -3.94 - 1.6 - - -6.61
AT1G67110 (CYP735A2)
-9.84 -2.52 -4.79 -3.17 -3.89 - -3.18 - - - - - - 2.71 -1.09 -5.08 -4.95 - 0.43 -2.9 - -2.62 -2.91 -3.56 -4.52 -4.04 -0.69 - -3.53 -6.49 -5.87 0.56 0.23 3.69 -0.83 -0.28 -0.08 2.08 -4.13 - - 2.72 -2.34 -3.07 3.11 - - -
AT1G76410 (ATL8)
-2.6 -1.28 -3.36 -3.88 -4.39 - -3.65 -7.84 - - -7.64 - - -0.2 0.67 1.22 2.62 2.16 2.91 -0.51 -2.47 0.35 -0.71 -0.04 -6.32 0.38 -1.96 -4.89 -0.16 -8.35 -2.21 -3.37 0.51 1.65 -1.76 0.71 0.96 1.72 1.76 -7.4 -5.17 0.63 -1.39 -5.92 -0.9 - - -7.05
AT1G76560 (CP12-3)
0.86 -0.85 -2.17 -2.73 -2.34 -3.57 -2.32 -3.15 -3.97 -4.43 -4.96 0.41 -4.86 -0.53 -1.08 -0.25 -2.39 -2.6 -1.85 0.24 -1.33 -0.44 -0.25 -0.47 1.26 -0.48 1.21 -1.66 -2.21 0.77 -1.51 -0.41 0.58 0.62 1.07 1.22 2.46 1.18 0.74 -1.29 -1.56 1.9 1.11 0.16 1.46 - - -1.14
AT2G05440 (GRP9)
-2.36 -6.25 - - - - - - - - - - - -6.19 - -6.98 - - -7.36 -7.14 -3.86 - - -1.59 -4.56 -0.85 -4.03 - - - -8.18 -3.14 4.32 2.47 -4.24 -2.93 0.08 -1.52 -1.12 - 2.02 3.23 -5.65 -5.06 2.47 - - -6.83
-2.34 0.82 - - -6.55 - -4.6 - - - - - - -2.76 -3.57 -7.47 -6.66 -7.92 -9.08 -1.92 - -7.41 - -2.91 -2.35 -3.17 2.14 - -5.17 -7.25 0.8 0.81 -1.66 0.23 -2.55 -0.82 1.93 0.34 -4.74 - - 3.18 2.68 0.98 2.94 - -1.27 2.07
AT2G31180 (MYB14)
-4.41 -2.49 - - - - - - - - - - - 1.73 -1.67 - - -1.65 -5.95 -6.21 - - - -2.46 -1.3 -2.95 1.16 1.41 -0.66 -5.09 -5.14 -0.37 0.36 1.99 -2.98 - 1.51 1.52 -4.03 - - 2.84 2.27 2.28 1.69 - - 2.45
- -5.61 -1.96 - - - - -1.96 -2.02 - - -1.2 - -4.36 - - - - - - - - - 1.22 - 1.52 -0.83 - -1.17 - - -5.15 -0.79 1.76 -7.46 0.83 4.1 1.93 0.96 - - 1.75 -3.41 - 3.07 - - -
AT2G36120 (DOT1)
-15.23 -5.94 - - - - - -10.0 - -10.26 - - -11.85 -0.85 -4.55 -8.71 -8.68 0.18 -1.99 -5.71 -7.89 -4.59 -5.62 -2.12 -4.16 -2.57 -0.68 -9.03 -5.69 -5.52 -6.41 -1.76 0.93 2.1 -2.27 3.31 3.42 2.2 -0.88 -4.55 - 0.4 -6.67 -8.89 3.46 - - -10.26
AT2G38320 (TBL34)
-6.64 -0.6 - -5.19 -7.47 - - - - - - -3.82 - -0.63 0.82 0.41 0.94 0.03 -4.33 -1.35 1.28 -0.42 -0.59 0.23 - 0.22 -5.74 -3.43 -0.18 -8.61 -2.26 1.29 0.46 1.62 -1.01 1.95 -2.57 0.89 -2.33 -1.95 - 3.08 2.35 -3.39 2.25 - - -0.78
-0.78 2.61 -2.17 -2.63 -3.38 - -3.08 - - -5.21 - - - 1.86 2.52 0.35 -1.73 -1.17 -2.47 -0.05 0.13 1.84 1.83 -1.64 -3.45 -1.91 - -2.16 -1.71 -3.78 -2.49 -2.23 -0.39 -0.59 -0.25 0.88 0.4 2.98 -2.78 -2.14 - 1.48 -0.2 -3.78 -0.71 - - -2.08
- -2.58 -7.31 - -7.44 - -5.79 - - -8.42 - -9.64 - -0.63 -1.18 -1.24 -7.03 -7.29 -1.45 -4.26 -7.19 -2.42 -3.36 -0.23 0.69 -0.05 1.07 1.1 -0.78 0.45 -4.97 1.11 1.85 2.05 -0.13 0.84 2.05 1.98 1.35 - - 3.28 -1.32 -6.16 1.34 - - -6.97
-4.81 0.01 -5.35 -7.12 -2.45 -0.19 -4.57 -6.04 -8.47 -7.54 - -8.6 - 0.89 0.2 1.15 1.73 -0.52 -2.49 0.03 -0.16 -0.01 -1.59 0.32 -5.29 0.87 -1.26 -3.18 -4.27 -7.53 -2.33 -0.06 0.76 0.57 -2.01 1.93 3.45 1.65 -0.44 -3.32 - -0.13 -1.66 -0.45 -0.39 0.78 0.56 -2.22
0.23 -2.01 - -1.61 -2.65 -3.56 -2.12 -3.72 -0.05 -1.94 - -1.52 - -1.96 - -3.15 -3.26 - 0.74 -2.81 - -1.55 -1.56 0.64 2.78 1.55 -0.18 -0.74 -0.54 3.57 - 2.29 -0.12 1.67 -0.56 1.14 -1.67 1.19 -1.93 - - -1.18 -1.51 - -2.09 - - -
-0.83 -3.01 -4.86 -2.8 -5.97 - -3.32 - - -8.16 -7.95 -8.6 - -5.38 -7.84 -7.06 - - -3.33 -5.95 -9.04 -8.34 -8.93 0.52 -0.72 1.51 2.88 -7.79 -1.01 -7.1 -2.32 0.49 -1.48 0.94 -9.89 0.92 3.36 1.75 -3.13 - - 3.55 -0.51 -7.23 1.11 - - -6.85
-2.62 -0.77 -1.89 -3.15 -3.74 -2.72 -4.08 -4.26 - - -4.82 -1.08 - 0.93 1.05 0.51 2.15 1.08 -3.37 -1.64 1.01 -0.36 -0.31 0.58 - 0.59 -2.47 -2.02 -2.34 -5.52 -2.49 -0.44 0.64 2.23 -1.43 0.14 -1.81 2.0 0.34 - - 2.34 -3.66 -4.05 2.77 - - -2.63
-2.13 0.92 -2.1 -2.12 -1.84 -1.86 -2.42 -3.92 -5.49 -5.49 -6.96 - -3.79 0.51 -0.18 -0.39 -0.52 -1.38 0.27 -0.05 -1.73 0.63 0.45 -0.78 -3.53 -0.67 -2.3 -1.8 -2.68 -3.27 -1.12 -1.17 1.31 1.47 -0.1 2.03 1.07 1.31 -0.18 -3.32 0.48 3.01 0.12 -1.52 2.17 -1.04 -5.52 -1.86
-1.61 -2.41 -1.58 -4.99 -2.24 -4.58 - -7.82 - -7.91 -6.03 -7.75 -8.42 -1.79 -1.04 -2.26 -2.42 -2.43 -4.44 -2.74 -2.63 -0.08 0.37 1.08 -5.9 1.39 -4.24 -1.22 -0.96 -7.77 -1.5 0.54 0.45 0.34 0.71 3.16 -0.87 1.98 -1.99 -5.21 - 2.26 2.02 - 0.75 2.62 - -0.63
-2.06 -0.68 -2.06 -2.37 -0.97 -0.5 -3.69 -0.96 -0.84 -1.48 -0.52 -3.43 -2.63 -0.47 0.35 0.99 1.8 0.72 -1.85 -1.11 1.53 0.44 -0.42 0.31 -3.38 0.53 -6.09 -3.51 -3.99 -4.12 -1.93 0.31 0.97 1.66 -0.43 1.68 -0.69 0.95 -0.71 - - 2.7 1.07 -3.96 1.45 - - -4.49
AT3G63280 (NEK4)
2.68 -1.19 -4.15 -1.64 -3.78 - -1.79 - - -8.97 - -7.97 - 0.88 -2.61 -1.74 -3.04 -3.23 -2.43 -1.1 -4.05 -1.6 -1.04 -1.06 0.03 -0.21 3.72 -2.1 -2.39 -1.76 -2.23 -1.09 -0.89 -0.07 -0.04 2.08 1.36 1.57 -0.86 -4.52 - 1.31 -0.06 -0.35 0.93 -3.6 -5.3 -1.5
AT4G00230 (XSP1)
0.52 0.51 -0.62 -1.6 -0.7 -0.85 -1.1 -1.04 -1.8 -1.17 -1.72 1.22 -3.27 -0.03 -0.05 0.84 1.32 0.45 -0.96 0.16 0.85 -0.09 -0.26 -0.03 -0.53 0.27 -0.64 -1.7 -0.68 -0.53 -0.73 -0.46 0.4 0.92 -0.3 0.94 0.72 1.13 0.81 -1.51 -0.86 0.52 -0.38 -0.32 0.93 -0.1 -0.51 -1.63
AT4G01850 (SAM2)
-0.03 -0.44 -0.42 -0.73 -0.86 -1.62 -0.69 -3.38 -3.47 -4.86 -3.9 -1.32 -5.14 0.15 0.55 -1.02 1.04 1.25 -1.26 -0.72 0.07 -0.51 -0.88 0.01 -4.11 -0.08 -1.0 0.15 -2.63 -4.79 -1.17 -0.39 -0.15 1.05 -0.97 0.41 0.09 0.95 -0.98 -2.29 -2.75 1.11 1.69 1.04 1.2 2.51 -0.55 1.07
-5.04 -0.45 -7.68 -7.64 - -8.11 - - -5.42 -7.65 - -7.65 -8.48 0.68 0.62 -0.2 0.88 0.7 -5.15 -1.66 0.73 0.27 0.38 0.78 -7.04 1.46 -5.51 -4.71 -6.98 -7.42 -2.02 -0.55 -0.24 1.82 -2.77 2.32 0.33 2.56 -2.07 -4.21 - 2.53 0.64 -5.37 2.43 -6.21 - -6.11
-2.82 -0.1 - - - - - - - - - - - -1.25 -1.39 -0.56 -0.53 0.29 -4.19 -0.53 1.12 -1.04 -2.77 1.26 -0.46 2.09 3.04 -3.08 -4.15 -5.57 -0.45 -0.11 0.46 0.82 0.41 1.44 1.27 1.59 -1.24 - - 3.03 -0.57 -1.94 -1.88 - - -3.19
AT4G22270 (MRB1)
-2.23 -0.93 -2.95 -2.95 -4.32 -2.9 -3.34 1.46 0.73 1.09 0.4 -5.2 0.85 0.32 -0.12 -1.03 0.59 -1.54 1.57 -1.16 -2.64 -1.6 -1.3 -0.1 -1.7 0.42 1.36 -1.71 -1.18 -3.29 -0.8 -1.58 -2.19 -1.31 0.08 1.21 2.29 0.58 0.46 -2.41 2.57 0.7 -1.77 -1.09 -0.56 -5.19 -3.35 -2.15
AT4G25434 (NUDT10)
- -3.11 - - -5.16 - - - - -7.79 -5.35 -4.01 -5.18 0.73 -2.67 -2.92 -4.68 -4.53 -4.83 -5.61 - 0.17 -1.47 -1.62 -2.26 -0.99 2.18 - -5.42 -4.86 -6.48 -4.2 -0.85 -3.0 -1.76 2.41 4.51 1.96 -0.38 -0.44 -3.22 0.98 -4.4 - 0.72 - - -2.43
-6.85 -1.14 - - - - - - - - - - - -1.29 -0.64 -0.87 -2.8 -1.44 -1.65 -1.69 -1.97 0.5 0.5 -1.22 -1.71 -0.94 0.66 - -6.91 -7.73 -5.38 -0.83 0.28 2.61 -3.47 -1.06 1.73 1.47 -0.81 -5.89 - 4.06 -1.54 -3.58 2.71 - - -6.69
-6.43 -2.62 - - - -8.3 - - - - - - -2.06 -1.79 -1.49 -1.27 -3.2 -3.26 -0.9 -2.37 -4.99 -0.31 -0.28 -1.81 -1.82 -1.37 1.82 - -9.22 -8.11 -5.12 -1.56 -0.46 0.87 -4.42 -0.05 3.95 1.62 -1.01 -6.8 - 3.42 0.73 -5.44 1.91 - - -1.57
- -0.91 -3.47 0.0 -1.84 -2.78 -0.6 2.36 0.24 0.04 0.23 -5.61 -1.41 0.32 0.88 1.07 2.04 0.81 1.07 -1.57 2.07 0.09 0.25 0.39 -6.72 1.0 -6.44 0.29 -4.29 - -3.48 -0.68 0.49 0.39 -0.93 0.52 -2.65 1.36 -1.74 - - 0.3 -2.07 -1.64 0.49 - - -2.12
-5.96 -2.1 - - -3.1 - - -3.19 -2.87 -1.49 - 2.68 -1.76 1.26 0.72 -1.0 -0.0 -1.04 -3.09 -3.87 -0.23 -3.61 -3.51 0.15 -4.44 0.36 -2.51 - - -5.32 -4.91 0.07 0.71 3.18 -3.49 0.36 -2.34 2.23 -0.53 - - 3.3 -2.71 - 0.72 - - -3.58
-6.97 -7.29 - - - - - - - - - - - -6.04 - - - - -6.75 -5.79 - - - -4.24 -6.07 -6.31 -4.93 - -3.21 -7.61 - -8.0 -0.41 2.49 -6.39 -4.22 4.72 0.39 -3.82 - - 2.16 -1.14 -4.13 3.1 - - -6.9
- -2.37 -2.09 -2.74 -2.73 -4.21 -1.87 - -7.35 -6.83 -5.4 - - -0.05 -0.45 0.33 0.46 -0.26 -4.85 -3.3 -0.26 -2.27 -1.76 1.71 -6.39 2.15 -4.08 - -8.24 -7.74 -3.95 -1.23 -0.57 1.27 -2.59 2.97 1.04 2.8 -2.71 - - 2.68 0.66 -6.31 1.9 - - -6.43
AT5G43780 (APS4)
-3.03 -2.22 -3.24 -3.77 -4.04 -6.1 -4.08 -8.6 -4.95 -9.48 -5.33 -11.33 -8.2 0.58 -2.4 0.05 -1.02 -0.22 -2.23 -2.43 -0.98 -2.36 -2.52 0.82 -0.92 1.88 2.84 -2.0 -3.23 -3.32 -1.55 -0.84 -0.59 1.54 -1.5 1.34 1.88 1.8 0.84 -4.84 -3.76 2.74 0.38 -1.36 0.6 -2.67 0.74 -2.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.