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Heatmap: Cluster_140 (HCCA)

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

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Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G02500 (MAT1)
 154.12 252.01 160.22 181.6 129.02 98.76 218.13 66.35 88.24 30.93 69.7 33.83 4.57 298.81 175.98 138.39 182.72 244.23 69.39 159.58 159.62 128.67 168.95 328.25 11.41 506.16 119.42 175.36 64.22 3.2 178.68 164.05 337.47 399.42 134.68 417.57 225.41 672.49 224.43 106.09 107.98 1216.9 562.13 268.86 504.66 1390.42 447.61 311.97
0.08 0.6 0.19 0.02 0.1 0.02 0.02 0.0 0.0 0.01 0.0 0.02 0.05 1.61 1.46 3.91 5.72 2.79 0.18 0.45 5.21 1.17 1.33 2.01 0.02 2.66 0.02 0.02 0.03 0.16 0.22 0.93 2.7 4.9 0.84 3.57 1.57 4.47 5.01 0.0 0.0 4.16 0.47 0.03 4.79 0.0 0.0 0.0
0.0 0.47 0.0 0.16 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.44 0.83 0.73 1.23 0.5 0.01 0.18 1.56 0.72 0.4 0.69 0.0 0.98 0.0 0.0 0.05 0.01 0.19 0.85 0.79 1.67 0.74 1.66 0.31 1.37 0.2 0.0 0.0 4.24 1.75 0.44 2.68 0.0 0.0 0.37
0.0 0.02 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.03 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.25 0.91 0.0 0.0 0.0 0.07 0.04 0.0 0.07 0.0 0.0 0.0
AT1G20160 (ATSBT5.2)
 0.57 3.34 0.26 0.14 0.19 0.07 0.05 0.01 0.01 0.0 0.02 0.0 0.0 25.28 3.98 5.29 1.87 5.68 2.27 1.77 0.6 4.18 6.12 8.98 1.69 15.64 33.05 0.8 0.05 0.08 6.0 0.31 10.49 43.06 1.61 14.99 196.52 36.53 11.71 1.05 0.0 78.89 2.38 0.3 35.79 0.0 0.0 0.16
AT1G43790 (TED6)
 0.12 12.8 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.05 0.0 0.0 0.0 33.7 16.96 60.45 140.24 64.91 2.24 6.62 95.53 18.3 14.39 42.75 0.21 50.12 0.24 0.0 1.98 0.04 6.58 17.5 20.21 78.39 15.08 64.85 11.65 98.13 8.19 0.0 0.0 62.4 11.38 0.21 88.62 0.0 0.0 0.13
0.16 6.01 0.07 0.0 0.0 0.06 0.0 0.0 0.06 0.05 0.0 0.08 8.03 2.13 0.67 0.34 1.72 1.16 0.97 1.12 0.12 0.0 0.08 2.46 0.13 3.47 3.5 0.17 0.38 0.07 4.34 0.25 0.43 2.93 0.02 3.89 3.22 2.72 2.95 0.0 0.0 2.37 5.96 0.13 3.28 0.0 0.0 0.94
0.01 1.37 0.0 0.12 0.0 0.01 0.04 0.06 0.48 0.31 0.75 1.85 1.45 5.5 1.81 7.28 14.84 2.54 0.24 0.37 4.74 1.85 1.67 5.46 0.03 6.42 0.45 0.47 0.41 0.0 1.44 1.11 2.1 3.89 0.68 12.98 0.4 5.76 0.48 0.13 0.0 7.66 1.31 0.0 4.92 0.0 0.0 0.02
0.0 0.06 0.0 0.17 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.13 0.04 0.14 0.0 0.01 0.01 0.0 0.08 0.02 0.07 0.0 0.08 0.0 0.02 0.03 0.0 0.02 0.05 0.13 0.24 0.05 0.27 0.06 0.2 0.05 0.0 0.0 0.96 0.13 0.0 0.51 0.0 0.0 0.02
AT1G58370 (RXF12)
 0.01 1.38 0.0 0.0 0.01 0.0 0.03 0.0 0.0 0.0 0.02 0.12 0.11 1.06 2.5 3.1 3.31 1.89 0.31 0.6 4.27 0.85 0.88 2.73 0.01 3.95 0.08 0.05 0.17 0.02 0.46 2.76 3.84 6.12 0.65 6.41 0.53 9.63 0.45 0.01 0.0 8.63 3.51 0.09 9.61 0.0 0.0 0.15
0.12 1.27 0.1 0.0 0.04 0.0 0.04 0.04 0.0 0.0 0.0 0.0 0.03 6.3 6.17 3.28 8.81 2.65 0.02 0.65 3.08 2.54 3.45 6.22 0.0 8.84 0.0 0.0 0.04 0.02 0.08 0.77 4.76 5.2 1.0 22.65 4.07 19.88 0.61 0.0 0.0 3.62 0.17 0.0 7.84 0.0 0.0 0.03
AT1G67110 (CYP735A2)
 0.0 0.14 0.03 0.09 0.05 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 5.29 0.38 0.02 0.03 0.0 1.09 0.11 0.0 0.13 0.11 0.07 0.04 0.05 0.5 0.0 0.07 0.01 0.01 1.19 0.95 10.4 0.45 0.66 0.76 3.4 0.05 0.0 0.0 5.31 0.16 0.1 6.95 0.0 0.0 0.0
AT1G76410 (ATL8)
 1.79 4.44 1.06 0.73 0.52 0.0 0.86 0.05 0.0 0.0 0.05 0.0 0.0 9.4 17.19 25.23 66.5 48.22 81.17 7.58 1.95 13.76 6.62 10.5 0.14 14.08 2.78 0.36 9.64 0.03 2.33 1.04 15.41 33.94 3.18 17.69 21.1 35.68 36.57 0.06 0.3 16.68 4.13 0.18 5.79 0.0 0.0 0.08
AT1G76560 (CP12-3)
 34.82 10.65 4.24 2.88 3.77 1.61 3.83 2.16 1.22 0.89 0.62 25.49 0.66 13.28 9.03 16.04 3.66 3.16 5.32 22.68 7.62 14.12 16.09 13.77 45.77 13.68 44.38 6.04 4.14 32.58 6.72 14.42 28.68 29.35 40.21 44.66 105.44 43.23 32.07 7.85 6.5 71.4 41.38 21.32 52.5 0.0 0.0 8.7
AT2G05440 (GRP9)
 0.78 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.03 0.0 0.0 0.02 0.03 0.28 0.0 0.0 1.34 0.17 2.24 0.25 0.0 0.0 0.0 0.01 0.46 80.28 22.37 0.21 0.53 4.25 1.4 1.86 0.0 16.37 37.69 0.08 0.12 22.39 0.0 0.0 0.04
0.62 5.54 0.0 0.0 0.03 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.46 0.26 0.02 0.03 0.01 0.01 0.83 0.0 0.02 0.0 0.42 0.62 0.35 13.79 0.0 0.09 0.02 5.47 5.48 0.99 3.67 0.54 1.77 11.92 3.95 0.12 0.0 0.0 28.38 20.13 6.18 24.1 0.0 1.29 13.11
AT2G31180 (MYB14)
 0.03 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.44 0.23 0.0 0.0 0.23 0.01 0.01 0.0 0.0 0.0 0.13 0.3 0.09 1.64 1.94 0.46 0.02 0.02 0.57 0.94 2.92 0.09 0.0 2.08 2.11 0.04 0.0 0.0 5.25 3.54 3.55 2.37 0.0 0.0 3.99
0.0 0.02 0.23 0.0 0.0 0.0 0.0 0.23 0.22 0.0 0.0 0.39 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.06 0.0 2.54 0.5 0.0 0.39 0.0 0.0 0.03 0.51 3.0 0.01 1.57 15.24 3.38 1.72 0.0 0.0 2.97 0.08 0.0 7.42 0.0 0.0 0.0
AT2G36120 (DOT1)
 0.0 1.31 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.07 0.0 0.0 0.02 44.35 3.42 0.19 0.2 90.68 20.24 1.53 0.34 3.32 1.63 18.41 4.48 13.52 50.09 0.15 1.55 1.75 0.94 23.68 152.92 344.12 16.67 793.58 855.31 368.73 43.66 3.43 0.0 105.81 0.79 0.17 881.2 0.0 0.0 0.07
AT2G38320 (TBL34)
 0.02 1.5 0.0 0.06 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.16 0.0 1.47 4.01 3.02 4.35 2.31 0.11 0.89 5.52 1.7 1.51 2.66 0.0 2.65 0.04 0.21 2.01 0.01 0.48 5.56 3.13 6.98 1.12 8.8 0.38 4.2 0.45 0.59 0.0 19.2 11.62 0.22 10.79 0.0 0.0 1.32
0.9 9.47 0.34 0.25 0.15 0.0 0.18 0.0 0.0 0.04 0.0 0.0 0.0 5.63 8.89 1.97 0.47 0.69 0.28 1.5 1.7 5.56 5.54 0.5 0.14 0.41 0.0 0.35 0.48 0.11 0.28 0.33 1.19 1.03 1.31 2.85 2.04 12.24 0.23 0.35 0.0 4.33 1.35 0.11 0.95 0.0 0.0 0.37
0.0 2.29 0.09 0.0 0.08 0.0 0.25 0.0 0.0 0.04 0.0 0.02 0.0 8.86 6.07 5.82 0.1 0.09 5.01 0.72 0.09 2.56 1.34 11.67 22.19 13.25 28.77 29.4 7.97 18.7 0.44 29.57 49.43 56.81 12.58 24.61 56.89 54.3 34.89 0.0 0.0 133.56 5.5 0.19 34.88 0.0 0.0 0.11
0.42 11.75 0.29 0.08 2.14 10.24 0.49 0.18 0.03 0.06 0.0 0.03 0.0 21.69 13.4 25.89 38.73 8.17 2.08 11.93 10.46 11.63 3.88 14.54 0.3 21.31 4.87 1.29 0.61 0.06 2.33 11.22 19.79 17.29 2.9 44.52 127.96 36.65 8.59 1.17 0.0 10.71 3.7 8.54 8.91 20.11 17.23 2.51
0.56 0.12 0.0 0.16 0.08 0.04 0.11 0.04 0.46 0.12 0.0 0.17 0.0 0.12 0.0 0.05 0.05 0.0 0.79 0.07 0.0 0.16 0.16 0.74 3.28 1.4 0.42 0.28 0.33 5.66 0.0 2.33 0.44 1.51 0.32 1.05 0.15 1.08 0.12 0.0 0.0 0.21 0.17 0.0 0.11 0.0 0.0 0.0
12.41 2.73 0.76 3.18 0.35 0.0 2.21 0.0 0.0 0.08 0.09 0.06 0.0 0.53 0.1 0.17 0.0 0.0 2.21 0.36 0.04 0.07 0.05 31.69 13.38 62.9 162.84 0.1 10.98 0.16 4.43 30.96 7.93 42.39 0.02 41.89 226.21 74.3 2.52 0.0 0.0 259.25 15.48 0.15 47.68 0.0 0.0 0.19
0.08 0.3 0.14 0.06 0.04 0.08 0.03 0.03 0.0 0.0 0.02 0.24 0.0 0.96 1.04 0.72 2.23 1.07 0.05 0.16 1.02 0.39 0.41 0.76 0.0 0.76 0.09 0.12 0.1 0.01 0.09 0.37 0.79 2.37 0.19 0.56 0.14 2.01 0.64 0.0 0.0 2.56 0.04 0.03 3.44 0.0 0.0 0.08
1.72 14.21 1.75 1.73 2.11 2.08 1.41 0.5 0.17 0.17 0.06 0.0 0.55 10.69 6.66 5.73 5.23 2.89 9.06 7.28 2.27 11.64 10.31 4.39 0.65 4.72 1.52 2.16 1.17 0.78 3.47 3.35 18.71 20.86 7.01 30.8 15.83 18.69 6.63 0.76 10.49 60.54 8.16 2.62 33.95 3.66 0.16 2.08
1.26 0.72 1.28 0.12 0.81 0.16 0.0 0.02 0.0 0.02 0.06 0.02 0.01 1.11 1.86 0.8 0.71 0.71 0.18 0.57 0.62 3.63 4.96 8.11 0.06 10.06 0.2 1.64 1.96 0.02 1.35 5.58 5.24 4.84 6.26 34.15 2.1 15.12 0.96 0.1 0.0 18.36 15.53 0.0 6.43 23.51 0.0 2.48
0.33 0.86 0.33 0.27 0.7 0.97 0.11 0.71 0.77 0.49 0.96 0.13 0.22 0.99 1.75 2.73 4.77 2.26 0.38 0.63 3.96 1.86 1.02 1.7 0.13 1.98 0.02 0.12 0.09 0.08 0.36 1.71 2.69 4.32 1.02 4.4 0.85 2.65 0.84 0.0 0.0 8.9 2.88 0.09 3.76 0.0 0.0 0.06
AT3G63280 (NEK4)
 28.38 1.93 0.25 1.41 0.32 0.0 1.28 0.0 0.0 0.01 0.0 0.02 0.0 8.14 0.73 1.32 0.54 0.47 0.82 2.05 0.27 1.46 2.15 2.12 4.5 3.82 58.06 1.03 0.84 1.31 0.94 2.08 2.38 4.21 4.3 18.62 11.32 13.12 2.44 0.19 0.0 10.97 4.23 3.46 8.43 0.36 0.11 1.56
AT4G00230 (XSP1)
 8.13 8.03 3.69 1.87 3.47 3.13 2.65 2.75 1.62 2.52 1.72 13.2 0.59 5.55 5.46 10.11 14.14 7.72 2.91 6.32 10.21 5.31 4.72 5.54 3.91 6.81 3.64 1.74 3.53 3.92 3.41 4.11 7.45 10.71 4.6 10.84 9.32 12.37 9.93 1.99 3.13 8.09 4.36 4.55 10.75 5.3 3.99 1.83
AT4G01850 (SAM2)
 269.12 202.8 205.59 165.73 151.57 89.61 169.83 26.38 24.8 9.47 18.34 110.04 7.82 304.89 401.28 135.36 565.28 654.42 114.42 167.11 287.76 192.74 149.12 277.18 15.96 259.88 137.07 304.47 44.42 9.9 121.75 209.74 248.18 570.27 140.66 364.72 291.91 529.38 138.99 56.34 40.85 592.1 887.4 566.33 630.87 1563.03 187.44 576.16
0.06 1.42 0.01 0.01 0.0 0.01 0.0 0.0 0.05 0.01 0.0 0.01 0.01 3.1 2.97 1.69 3.56 3.15 0.05 0.61 3.21 2.33 2.52 3.33 0.01 5.31 0.04 0.07 0.02 0.01 0.48 1.32 1.64 6.82 0.28 9.66 2.43 11.41 0.46 0.1 0.0 11.18 3.03 0.05 10.45 0.03 0.0 0.03
0.46 3.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.37 1.24 2.21 2.25 3.97 0.18 2.24 7.05 1.58 0.48 7.79 2.37 13.79 26.68 0.38 0.18 0.07 2.37 3.0 4.47 5.71 4.31 8.81 7.8 9.76 1.38 0.0 0.0 26.52 2.18 0.85 0.88 0.0 0.0 0.36
AT4G22270 (MRB1)
 1.51 3.72 0.92 0.92 0.36 0.95 0.7 19.54 11.75 15.07 9.37 0.19 12.75 8.88 6.52 3.47 10.66 2.44 21.13 3.18 1.14 2.34 2.88 6.6 2.19 9.48 18.22 2.17 3.13 0.73 4.07 2.37 1.55 2.85 7.51 16.44 34.69 10.61 9.78 1.33 42.09 11.53 2.08 3.34 4.82 0.19 0.69 1.6
AT4G25434 (NUDT10)
 0.0 0.21 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.01 0.05 0.11 0.05 3.05 0.29 0.24 0.07 0.08 0.06 0.04 0.0 2.08 0.67 0.6 0.38 0.93 8.38 0.0 0.04 0.06 0.02 0.1 1.02 0.23 0.54 9.79 42.11 7.18 1.42 1.36 0.2 3.63 0.09 0.0 3.05 0.0 0.0 0.34
0.26 13.87 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 12.49 19.61 16.69 4.39 11.25 9.72 9.5 7.81 43.18 43.23 13.12 9.35 15.91 48.23 0.0 0.25 0.14 0.73 17.22 37.04 187.35 2.76 14.68 101.53 84.54 17.39 0.51 0.0 511.85 10.55 2.56 200.14 0.0 0.0 0.3
0.39 5.47 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 8.05 9.69 11.95 13.92 3.66 3.5 17.94 6.47 1.06 27.14 27.56 9.56 9.53 13.0 118.05 0.0 0.06 0.12 0.96 11.35 24.31 61.45 1.56 32.34 517.05 103.14 16.7 0.3 0.0 359.21 55.59 0.77 126.46 0.0 0.0 11.28
0.0 0.57 0.1 1.06 0.3 0.15 0.7 5.43 1.25 1.09 1.24 0.02 0.4 1.32 1.96 2.22 4.37 1.86 2.23 0.36 4.46 1.13 1.26 1.39 0.01 2.13 0.01 1.29 0.05 0.0 0.09 0.66 1.48 1.39 0.56 1.52 0.17 2.71 0.32 0.0 0.0 1.3 0.25 0.34 1.49 0.0 0.0 0.24
0.19 2.72 0.0 0.0 1.37 0.0 0.0 1.28 1.59 4.16 0.0 74.89 3.46 27.92 19.31 5.86 11.68 5.7 1.37 0.8 9.99 0.96 1.03 12.93 0.54 14.96 2.05 0.0 0.0 0.29 0.39 12.28 19.19 106.17 1.04 15.04 2.31 54.69 8.07 0.0 0.0 114.9 1.79 0.0 19.21 0.0 0.0 0.98
0.02 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.03 0.05 0.0 0.0 0.0 0.15 0.04 0.04 0.09 0.0 0.31 0.01 0.0 0.01 2.14 15.97 0.03 0.15 75.05 3.74 0.2 0.0 0.0 12.72 1.29 0.16 24.52 0.0 0.0 0.02
0.0 0.85 1.04 0.67 0.67 0.24 1.21 0.0 0.03 0.04 0.11 0.0 0.0 4.29 3.25 5.57 6.11 3.71 0.15 0.45 3.69 0.92 1.31 14.47 0.05 19.64 0.26 0.0 0.01 0.02 0.29 1.89 2.99 10.68 0.74 34.74 9.08 30.91 0.68 0.0 0.0 28.39 7.02 0.06 16.5 0.0 0.0 0.05
AT5G43780 (APS4)
 7.6 13.35 6.57 4.54 3.76 0.9 3.67 0.16 2.01 0.09 1.54 0.02 0.21 92.48 11.76 64.17 30.56 53.32 13.26 11.52 31.44 12.07 10.84 109.87 32.7 228.08 444.3 15.51 6.6 6.2 21.2 34.64 41.35 179.84 21.98 157.49 228.91 215.7 110.9 2.16 4.58 414.74 80.97 24.2 94.11 9.78 103.83 12.45

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)