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  5. AT5G07760

AT5G07760


Description : formin homology 2 domain-containing protein / FH2 domain-containing protein


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07760
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Aop_g42606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20259 AFH14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g31460.1 LOC_Os03g31460 Formin-like protein 12 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08540.2 LOC_Os06g08540 Formin-like protein 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g24420.1 AFH14 group-II formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Nbi_g09182 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ppi_g16631 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Tin_g44237 AFH14 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0007015 actin filament organization RCA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP HCCA
BP GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 128 480
IPR015425 FH2_Formin 510 805
No external refs found!