1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G07560

AT5G07560 (ATGRP20, GRP20)


Aliases : ATGRP20, GRP20

Description : glycine-rich protein 20


Gene families : OG0001696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001696_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07560
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00251930 OLE3, OLEO4,... Lipid metabolism.lipid bodies-associated activities.oleosin 0.05 OrthoFinder output from all 47 species
AMTR_s00056p00188310 evm_27.TU.AmTr_v1... Lipid metabolism.lipid bodies-associated activities.oleosin 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00122760 evm_27.TU.AmTr_v1... Lipid metabolism.lipid bodies-associated activities.oleosin 0.02 OrthoFinder output from all 47 species
AMTR_s00147p00069460 evm_27.TU.AmTr_v1... Lipid metabolism.lipid bodies-associated activities.oleosin 0.03 OrthoFinder output from all 47 species
AT3G27660 OLE3, OLEO4 oleosin 4 0.05 OrthoFinder output from all 47 species
Ceric.34G053600.1 Ceric.34G053600 Oleosin-type lipid droplet structural protein & original... 0.03 OrthoFinder output from all 47 species
Ore_g39326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57490 No alias Oleosin-type lipid droplet structural protein & original... 0.03 OrthoFinder output from all 47 species
Ppi_g00490 No alias Oleosin-type lipid droplet structural protein & original... 0.06 OrthoFinder output from all 47 species
Ppi_g10420 OLE3, OLEO4 Oleosin-type lipid droplet structural protein & original... 0.02 OrthoFinder output from all 47 species
Ppi_g21043 No alias Oleosin-type lipid droplet structural protein & original... 0.02 OrthoFinder output from all 47 species
Smo18574 OLE1, OLEO1 Lipid metabolism.lipid bodies-associated activities.oleosin 0.04 OrthoFinder output from all 47 species
Smo28429 No alias Lipid metabolism.lipid bodies-associated activities.oleosin 0.03 OrthoFinder output from all 47 species
Solyc02g086490.3.1 Solyc02g086490 oleosin 0.05 OrthoFinder output from all 47 species
Solyc06g060840.1.1 OLE1, OLEO1,... oleosin 0.04 OrthoFinder output from all 47 species
Solyc06g069260.1.1 Solyc06g069260 oleosin 0.03 OrthoFinder output from all 47 species
Solyc08g066040.1.1 OLE1, OLEO1,... oleosin 0.06 OrthoFinder output from all 47 species
Solyc08g078160.3.1 OLE1, OLEO1,... oleosin 0.04 OrthoFinder output from all 47 species
Spa_g47624 No alias Oleosin-type lipid droplet structural protein & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005349_P001 Zm00001e005349 oleosin 0.03 OrthoFinder output from all 47 species
Zm00001e007353_P001 OLE1, OLEO1,... oleosin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding ISS Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0019915 lipid storage ISS Interproscan
BP GO:0019953 sexual reproduction ISS Interproscan
MF GO:0045735 nutrient reservoir activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005788 endoplasmic reticulum lumen IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009859 pollen hydration IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
CC GO:0070505 pollen coat IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0072533 tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity IEP HCCA
MF GO:0072547 tricoumaroylspermidine meta-hydroxylase activity IEP HCCA
MF GO:0072548 dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity IEP HCCA
MF GO:0072549 monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity IEP HCCA
InterPro domains Description Start Stop
IPR000136 Oleosin 31 112
No external refs found!