AT5G07200 (ATGA20OX3, YAP169, GA20OX3)

Aliases : ATGA20OX3, YAP169, GA20OX3

Description : gibberellin 20-oxidase 3

Gene families : OG0003609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003609_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G07200
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00187150	GA5, GA20OX1,...	Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase	0.02	OrthoFinder output from all 47 species
AT1G44090	ATGA20OX5, GA20OX5	gibberellin 20-oxidase 5	0.04	OrthoFinder output from all 47 species
Adi_g009762	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Als_g02988	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Aob_g22002	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.02	OrthoFinder output from all 47 species
Aspi01Gene55671.t1	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Ceric.26G046000.1	ATGA20OX2,...	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
GSVIVT01008782001	ATGA20OX2,...	Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase	0.03	OrthoFinder output from all 47 species
GSVIVT01026466001	ATGA20OX2,...	Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase	0.04	OrthoFinder output from all 47 species
GSVIVT01027572001	GA5, GA20OX1,...	Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase	0.04	OrthoFinder output from all 47 species
Gb_19227	GA5, GA20OX1,...	gibberellin 20-oxidase	0.02	OrthoFinder output from all 47 species
LOC_Os01g66100.1	GA5, GA20OX1,...	gibberellin 20-oxidase	0.03	OrthoFinder output from all 47 species
LOC_Os03g63970.1	GA5, GA20OX1,...	gibberellin 20-oxidase	0.05	OrthoFinder output from all 47 species
LOC_Os05g34854.1	GA5, GA20OX1,...	gibberellin 20-oxidase	0.04	OrthoFinder output from all 47 species
LOC_Os07g07420.1	ATGA20OX2,...	gibberellin 20-oxidase	0.06	OrthoFinder output from all 47 species
Len_g30410	ATGA20OX2,...	EC_1.14 oxidoreductase acting on paired donor with...	0.05	OrthoFinder output from all 47 species
MA_281894g0010	ATGA20OX2,...	gibberellin 20-oxidase	0.03	OrthoFinder output from all 47 species
Ore_g27731	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.06	OrthoFinder output from all 47 species
Ore_g27736	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.04	OrthoFinder output from all 47 species
Pnu_g05556	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.04	OrthoFinder output from all 47 species
Pnu_g23645	GA5, GA20OX1,...	EC_1.14 oxidoreductase acting on paired donor with...	0.05	OrthoFinder output from all 47 species
Smo115673	ATGA20OX3,...	Gibberellin 20 oxidase 1-D OS=Triticum aestivum	0.04	OrthoFinder output from all 47 species
Solyc01g093980.3.1	ATGA20OX3,...	gibberellin 20-oxidase	0.06	OrthoFinder output from all 47 species
Solyc03g006880.3.1	GA5, GA20OX1,...	gibberellin 20-oxidase	0.02	OrthoFinder output from all 47 species
Solyc06g050110.2.1	ATGA20OX2,...	gibberellin 20-oxidase	0.03	OrthoFinder output from all 47 species
Zm00001e006416_P001	ATGA20OX2,...	gibberellin 20-oxidase	0.01	OrthoFinder output from all 47 species
Zm00001e019049_P002	GA5, GA20OX1,...	gibberellin 20-oxidase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	RCA	Interproscan
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	IDA	Interproscan
BP	GO:0009686	gibberellin biosynthetic process	RCA	Interproscan
BP	GO:0009686	gibberellin biosynthetic process	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	RCA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045544	gibberellin 20-oxidase activity	IDA	Interproscan
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000248	C-5 sterol desaturase activity	IEP	HCCA
MF	GO:0003825	alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0004108	citrate (Si)-synthase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004866	endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006722	triterpenoid metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010054	trichoblast differentiation	IEP	HCCA
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0015020	glucuronosyltransferase activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
BP	GO:0016104	triterpenoid biosynthetic process	IEP	HCCA
CC	GO:0016602	CCAAT-binding factor complex	IEP	HCCA
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	HCCA
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
MF	GO:0030414	peptidase inhibitor activity	IEP	HCCA
CC	GO:0031012	extracellular matrix	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	HCCA
MF	GO:0036440	citrate synthase activity	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
MF	GO:0052691	UDP-arabinopyranose mutase activity	IEP	HCCA
MF	GO:0061134	peptidase regulator activity	IEP	HCCA
MF	GO:0061135	endopeptidase regulator activity	IEP	HCCA
MF	GO:0070704	sterol desaturase activity	IEP	HCCA
MF	GO:0080116	glucuronoxylan glucuronosyltransferase activity	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005123	Oxoglu/Fe-dep_dioxygenase	223	321
IPR026992	DIOX_N	58	161

External Links

No external refs found!

AT5G07200 (ATGA20OX3, YAP169, GA20OX3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation