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AT5G04170


Description : Calcium-binding EF-hand family protein


Gene families : OG0002864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G04170

Target Alias Description ECC score Gene Family Method Actions
Adi_g042692 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00891 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g04480.1 LOC_Os11g04480 no description available(sp|q2qy10|cbp_orysj : 361.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g04240.1 LOC_Os12g04240 no description available(sp|q2qy10|cbp_orysj : 362.0) 0.03 OrthoFinder output from all 47 species
Nbi_g24952 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12816 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g079890.2.1 Solyc10g079890 no description available(sp|q2qy10|cbp_orysj : 306.0) 0.03 OrthoFinder output from all 47 species
Solyc11g068460.2.1 Solyc11g068460 Probable calcium-binding protein CML48 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
BP GO:0051645 Golgi localization RCA Interproscan
BP GO:0051646 mitochondrion localization RCA Interproscan
BP GO:0060151 peroxisome localization RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005522 profilin binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009970 cellular response to sulfate starvation IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098754 detoxification IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 257 276
IPR002048 EF_hand_dom 188 209
No external refs found!