AT5G02320 (ATMYB3R5, MYB3R-5)

Aliases : ATMYB3R5, MYB3R-5

Description : myb domain protein 3r-5

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02320
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00225600	MYBR1, MYB44,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AMTR_s00012p00208260	MYB3R-3,...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AMTR_s00119p00105590	LOF2, MYB105,...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AT5G67300	MYBR1, MYB44,...	myb domain protein r1	0.03	OrthoFinder output from all 47 species
Adi_g104048	AtMYB109, MYB109	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Als_g06167	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Als_g27407	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene14847.t1	MYB70, AtMYB70,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene66011.t1	MYB77, Aspi01Gene66011	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0105.g044929	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0125.g048539	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Azfi_s0243.g059882	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Cba_g19865	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Dac_g46190	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g12904	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
GSVIVT01009566001	MYB70, AtMYB70	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
GSVIVT01027493001	MYB3R-1,...	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
LOC_Os04g08590.1	LOC_Os04g08590	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Msp_g07801	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Nbi_g10786	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.04	OrthoFinder output from all 47 species
Pir_g65999	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Pnu_g08134	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12037	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Ppi_g12915	AtMYB124, MYB124, FLP	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14529	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000153	MYB56, AtMYB56	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Solyc09g011780.3.1	MYB1, AtMYB1,...	transcription factor (MYB)	0.01	OrthoFinder output from all 47 species
Spa_g16126	MYB56, AtMYB56	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Tin_g14587	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0010223	secondary shoot formation	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0010346	shoot axis formation	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016629	12-oxophytodienoate reductase activity	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	127	173
IPR001005	SANT/Myb	75	121
IPR001005	SANT/Myb	179	222

External Links

No external refs found!

AT5G02320 (ATMYB3R5, MYB3R-5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation