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  5. AT5G01320

AT5G01320


Description : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01320
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ala_g11584 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.45 No alias Pyruvate decarboxylase 2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Sam_g18720 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31276 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo157772 PDC2 Carbohydrate metabolism.fermentation.alcoholic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004737 pyruvate decarboxylase activity ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0031425 chloroplast RNA processing IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045962 positive regulation of development, heterochronic IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
CC GO:0070860 RNA polymerase I core factor complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR011766 TPP_enzyme_TPP-bd 449 574
IPR012000 Thiamin_PyroP_enz_cen_dom 239 351
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 42 213
No external refs found!