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  5. AT4G39760

AT4G39760


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0005233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39760

Target Alias Description ECC score Gene Family Method Actions
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G08810 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G24610 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G23580 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.11 OrthoFinder output from all 47 species
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G34170 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.09 OrthoFinder output from all 47 species
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G39750 No alias F-box family protein-related 0.15 OrthoFinder output from all 47 species
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.1 OrthoFinder output from all 47 species
AT5G28160 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.1 OrthoFinder output from all 47 species
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 57
IPR006652 Kelch_1 167 210
No external refs found!