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  5. AT4G37740

AT4G37740 (GRF2, AtGRF2)


Aliases : GRF2, AtGRF2

Description : growth-regulating factor 2


Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G37740

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00189460 GRF4, AtGRF4,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.06 OrthoFinder output from all 47 species
AMTR_s00069p00196720 GRF1, AtGRF1,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
Adi_g059082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26167 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Als_g10136 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Als_g16124 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Aob_g26666 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21331.t1 GRF6, AtGRF6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22371.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Ceric.15G046200.1 GRF1, AtGRF1,... component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Ceric.19G047800.1 GRF2, AtGRF2,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Dac_g14130 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g14903 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g15470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16923 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g19232 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g11812 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g26378 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007165001 GRF2, AtGRF2 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
GSVIVT01015095001 GRF5, AtGRF5 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.07 OrthoFinder output from all 47 species
GSVIVT01016762001 GRF5, AtGRF5 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.08 OrthoFinder output from all 47 species
GSVIVT01019913001 GRF3, AtGRF3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
GSVIVT01033800001 GRF3, AtGRF3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.05 OrthoFinder output from all 47 species
Gb_05477 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Gb_20443 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g47280.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.11 OrthoFinder output from all 47 species
LOC_Os02g53690.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g47140.1 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.07 OrthoFinder output from all 47 species
LOC_Os03g51970.1 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g48510.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.13 OrthoFinder output from all 47 species
LOC_Os06g02560.1 GRF2, AtGRF2,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g29980.1 GRF2, AtGRF2,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Lfl_g18164 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Lfl_g24257 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
MA_111469g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
MA_137877g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
MA_18836g0010 GRF5, AtGRF5 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Mp8g16900.1 GRF2, AtGRF2 component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Msp_g44210 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g07300 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g38721 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Ore_g20696 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g54451 GRF9, AtGRF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63627 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011382 No alias not classified & original description: CDS=103-1059 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011385 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019225 No alias not classified & original description: CDS=695-3535 0.04 OrthoFinder output from all 47 species
Smo420739 GRF2, AtGRF2 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
Solyc01g091540.3.1 GRF9, AtGRF9,... component GRF of GRF-GIF transcriptional complex 0.09 OrthoFinder output from all 47 species
Solyc03g082430.1.1 AtGRF7, GRF7,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Solyc07g041640.3.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.08 OrthoFinder output from all 47 species
Solyc08g005430.3.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Solyc08g079800.4.1 GRF2, AtGRF2,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Solyc08g083230.3.1 AtGRF8, GRF8,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Solyc09g009200.3.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Solyc10g083510.2.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Solyc12g096070.2.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.06 OrthoFinder output from all 47 species
Spa_g06684 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Tin_g11764 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Tin_g45753 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e011207_P003 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Zm00001e012104_P002 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Zm00001e015436_P001 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.1 OrthoFinder output from all 47 species
Zm00001e015561_P002 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.1 OrthoFinder output from all 47 species
Zm00001e023229_P001 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Zm00001e023769_P003 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Zm00001e029851_P005 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.12 OrthoFinder output from all 47 species
Zm00001e030774_P001 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Zm00001e036224_P001 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009845 seed germination RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
BP GO:0048366 leaf development IGI Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009946 proximal/distal axis specification IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0047434 indolepyruvate decarboxylase activity IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048448 stamen morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048455 stamen formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000024 regulation of leaf development IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014978 Gln-Leu-Gln_QLQ 164 197
IPR014977 WRC_dom 228 270
No external refs found!