Aliases : SRS2, STY2
Description : Lateral root primordium (LRP) protein-related
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT4G36260 | |
Cluster | HCCA: Cluster_107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g045684 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g069569 | LRP1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g077130 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g079599 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g106034 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g17440 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g46734 | SRS7 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g23682 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27015 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene30272.t1 | SHI, Aspi01Gene30272 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G035200.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g13440 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g16665 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g47477 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g72490.1 | LRP1, LOC_Os01g72490 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g32070.1 | LRP1, LOC_Os05g32070 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Len_g31120 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g19510.1 | SHI | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g14706 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g084680.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g29778 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30774 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e024681_P001 | SHI, Zm00001e024681 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028304_P001 | LRP1, Zm00001e028304 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | NAS | Interproscan |
CC | GO:0005634 | nucleus | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0009855 | determination of bilateral symmetry | RCA | Interproscan |
BP | GO:0009887 | animal organ morphogenesis | RCA | Interproscan |
BP | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | NAS | Interproscan |
BP | GO:0009944 | polarity specification of adaxial/abaxial axis | RCA | Interproscan |
BP | GO:0010014 | meristem initiation | RCA | Interproscan |
BP | GO:0010051 | xylem and phloem pattern formation | IGI | Interproscan |
BP | GO:0010051 | xylem and phloem pattern formation | RCA | Interproscan |
BP | GO:0010252 | auxin homeostasis | IGI | Interproscan |
BP | GO:0048439 | flower morphogenesis | RCA | Interproscan |
BP | GO:0048479 | style development | IGI | Interproscan |
BP | GO:0048480 | stigma development | IGI | Interproscan |
BP | GO:0048519 | negative regulation of biological process | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000741 | karyogamy | IEP | HCCA |
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0009061 | anaerobic respiration | IEP | HCCA |
BP | GO:0009690 | cytokinin metabolic process | IEP | HCCA |
BP | GO:0009823 | cytokinin catabolic process | IEP | HCCA |
BP | GO:0009888 | tissue development | IEP | HCCA |
BP | GO:0009911 | positive regulation of flower development | IEP | HCCA |
BP | GO:0010075 | regulation of meristem growth | IEP | HCCA |
BP | GO:0010087 | phloem or xylem histogenesis | IEP | HCCA |
BP | GO:0010089 | xylem development | IEP | HCCA |
BP | GO:0010197 | polar nucleus fusion | IEP | HCCA |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | HCCA |
BP | GO:0040008 | regulation of growth | IEP | HCCA |
BP | GO:0042447 | hormone catabolic process | IEP | HCCA |
BP | GO:0048284 | organelle fusion | IEP | HCCA |
BP | GO:0048507 | meristem development | IEP | HCCA |
BP | GO:0048513 | animal organ development | IEP | HCCA |
BP | GO:0048582 | positive regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048638 | regulation of developmental growth | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
BP | GO:2000243 | positive regulation of reproductive process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |