AT4G36260 (SRS2, STY2)


Aliases : SRS2, STY2

Description : Lateral root primordium (LRP) protein-related


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G36260
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Adi_g045684 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069569 LRP1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077130 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079599 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17440 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46734 SRS7 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23682 SRS1, STY1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27015 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30272.t1 SHI, Aspi01Gene30272 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G058400.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g13440 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16665 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.07 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72490.1 LRP1, LOC_Os01g72490 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
LOC_Os05g32070.1 LRP1, LOC_Os05g32070 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Len_g31120 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_2299g0010 LRP1 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Mp3g19510.1 SHI transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Pnu_g14706 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g084680.3.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30774 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004006_P001 SHI, Zm00001e004006 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e024681_P001 SHI, Zm00001e024681 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e028304_P001 LRP1, Zm00001e028304 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Zm00001e034798_P001 SRS1, STY1,... transcription factor (SRS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity NAS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway NAS Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation IGI Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0010252 auxin homeostasis IGI Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048479 style development IGI Interproscan
BP GO:0048480 stigma development IGI Interproscan
BP GO:0048519 negative regulation of biological process RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009823 cytokinin catabolic process IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042447 hormone catabolic process IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!