AT4G33330 (PGSIP3, GUX2)

Aliases : PGSIP3, GUX2

Description : plant glycogenin-like starch initiation protein 3

Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G33330

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00245930	PGSIP3, GUX2,...	Cell...	0.05	OrthoFinder output from all 47 species
AMTR_s00060p00013040	PGSIP3, GUX2,...	Cell...	0.04	OrthoFinder output from all 47 species
AT1G08990	PGSIP5	plant glycogenin-like starch initiation protein 5	0.06	OrthoFinder output from all 47 species
AT3G18660	PGSIP1, GUX1	plant glycogenin-like starch initiation protein 1	0.04	OrthoFinder output from all 47 species
Ala_g06290	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05031	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g38125	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04525	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0026.g023444	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g62374	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G066300.1	PGSIP2, GUX3,...	glucuronosyltransferase *(GUX) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g20937	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10467	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009501001	PGSIP3, GUX2	Cell...	0.04	OrthoFinder output from all 47 species
GSVIVT01026525001	PGSIP1, GUX1	Cell...	0.04	OrthoFinder output from all 47 species
Gb_06192	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.06	OrthoFinder output from all 47 species
LOC_Os03g08600.1	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Len_g19254	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g29117	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
MA_35705g0010	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.04	OrthoFinder output from all 47 species
MA_8597011g0010	PGSIP2, GUX3	glucuronosyltransferase (GUX)	0.05	OrthoFinder output from all 47 species
Mp4g08210.1	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.06	OrthoFinder output from all 47 species
Ppi_g46456	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16817	No alias	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g078980.4.1	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.04	OrthoFinder output from all 47 species
Solyc04g078990.4.1	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.05	OrthoFinder output from all 47 species
Solyc11g005760.3.1	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Spa_g02625	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g30363	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g02808	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000623_P001	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.07	OrthoFinder output from all 47 species
Zm00001e019071_P001	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	RCA	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	ISS	Interproscan
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009834	plant-type secondary cell wall biogenesis	IGI	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0010417	glucuronoxylan biosynthetic process	IMP	Interproscan
MF	GO:0015020	glucuronosyltransferase activity	IDA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISS	Interproscan
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042546	cell wall biogenesis	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	RCA	Interproscan
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	IDA	Interproscan
BP	GO:0045492	xylan biosynthetic process	IGI	Interproscan
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0080116	glucuronoxylan glucuronosyltransferase activity	IMP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003825	alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	HCCA
BP	GO:0010054	trichoblast differentiation	IEP	HCCA
BP	GO:0010101	post-embryonic root morphogenesis	IEP	HCCA
BP	GO:0010102	lateral root morphogenesis	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
CC	GO:0031012	extracellular matrix	IEP	HCCA
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	HCCA
MF	GO:0045544	gibberellin 20-oxidase activity	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
MF	GO:0052691	UDP-arabinopyranose mutase activity	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002495	Glyco_trans_8	306	410

External Links

No external refs found!

AT4G33330 (PGSIP3, GUX2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation