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Description : sequence-specific DNA binding transcription factors
Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00228840 | UPB1,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g029675 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g32990 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00479 | IBH1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20907 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05093 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g64583 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29507.t1 | Aspi01Gene29507 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29136 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g13089 | IBH1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13027 | No alias | bHLH-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01023743001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g08220.1 | LOC_Os02g08220 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g44320.1 | LOC_Os06g44320 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| MA_946997g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05867 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g42615 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05431 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34499 | GT140, IND1, IND, EDA33 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g058670.3.1 | Solyc01g058670 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g079270.1.1 | UPB1, Solyc01g079270 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g38345 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006304 | DNA modification | IEP | HCCA |
| BP | GO:0006305 | DNA alkylation | IEP | HCCA |
| BP | GO:0006306 | DNA methylation | IEP | HCCA |
| BP | GO:0006694 | steroid biosynthetic process | IEP | HCCA |
| BP | GO:0008202 | steroid metabolic process | IEP | HCCA |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
| CC | GO:0009505 | plant-type cell wall | IEP | HCCA |
| BP | GO:0016125 | sterol metabolic process | IEP | HCCA |
| BP | GO:0016126 | sterol biosynthetic process | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | HCCA |
| BP | GO:0080167 | response to karrikin | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:2000280 | regulation of root development | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |