AT4G30130

Description : Protein of unknown function (DUF630 and DUF632)

Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G30130
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00189870	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00180200	evm_27.TU.AmTr_v1...	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00092p00040150	evm_27.TU.AmTr_v1...	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
AT4G39790	No alias	Protein of unknown function (DUF630 and DUF632)	0.03	OrthoFinder output from all 47 species
Adi_g056140	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g076957	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g13520	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g19045	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g39411	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g25168	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Als_g13249	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g15683	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08326	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene24019.t1	Aspi01Gene24019	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene37234.t1	Aspi01Gene37234	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0266.g060966	No alias	not classified & original description: CDS=547-2748	0.03	OrthoFinder output from all 47 species
Cba_g01214	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14622	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G064300.1	Ceric.03G064300	not classified & original description: pacid=50572356...	0.09	OrthoFinder output from all 47 species
Ceric.17G022700.1	Ceric.17G022700	not classified & original description: pacid=50618371...	0.05	OrthoFinder output from all 47 species
Ceric.21G041700.1	Ceric.21G041700	not classified & original description: pacid=50603626...	0.07	OrthoFinder output from all 47 species
Ceric.27G029900.1	Ceric.27G029900	not classified & original description: pacid=50605026...	0.09	OrthoFinder output from all 47 species
Dac_g02345	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g10961	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g12389	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g01809	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g14883	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16949	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g03848	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01004516001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01018276001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01018739001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01022363001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01023992001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01035712001	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_04769	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g31580.1	LOC_Os01g31580	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os05g07980.1	LOC_Os05g07980	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os09g37040.1	LOC_Os09g37040	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Len_g03363	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g58015	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g11019	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432395g0010	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_13974g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_1869g0010	No alias	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Msp_g13560	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g44146	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g01272	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g09766	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g05269	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16376	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001002	No alias	not classified & original description: CDS=529-2772	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021336	No alias	not classified & original description: CDS=1-2424	0.05	OrthoFinder output from all 47 species
Sam_g16580	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g47613	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g090270.4.1	Solyc01g090270	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc01g111740.3.1	Solyc01g111740	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc02g083610.4.1	Solyc02g083610	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc04g054880.3.1	Solyc04g054880	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Spa_g12290	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g56309	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g19034	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003599_P001	Zm00001e003599	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e015309_P001	Zm00001e015309	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e021207_P003	Zm00001e021207	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e021917_P001	Zm00001e021917	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Zm00001e027205_P001	Zm00001e027205	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e035963_P001	Zm00001e035963	Nitrate regulatory gene2 protein OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007267	cell-cell signaling	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009616	RNAi-mediated antiviral immune response	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009886	post-embryonic animal morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010267	ta-siRNA processing	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016441	post-transcriptional gene silencing	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023052	signaling	None	Extended
BP	GO:0030422	siRNA processing	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	RCA	Interproscan
BP	GO:0031048	RNA-mediated heterochromatin formation	RCA	Interproscan
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	None	Extended
BP	GO:0035196	miRNA processing	RCA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048449	floral organ formation	None	Extended
BP	GO:0048451	petal formation	RCA	Interproscan
BP	GO:0048453	sepal formation	RCA	Interproscan
BP	GO:0048481	plant ovule development	RCA	Interproscan
BP	GO:0048507	meristem development	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0051607	defense response to virus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0070918	regulatory ncRNA processing	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005677	chromatin silencing complex	IEP	HCCA
CC	GO:0005819	spindle	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005881	cytoplasmic microtubule	IEP	HCCA
BP	GO:0006349	regulation of gene expression by genomic imprinting	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0007129	homologous chromosome pairing at meiosis	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
CC	GO:0009574	preprophase band	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0009933	meristem structural organization	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010234	anther wall tapetum cell fate specification	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
BP	GO:0016458	obsolete gene silencing	IEP	HCCA
BP	GO:0016572	obsolete histone phosphorylation	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022403	cell cycle phase	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
CC	GO:0043076	megasporocyte nucleus	IEP	HCCA
CC	GO:0043078	polar nucleus	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0044848	biological phase	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048581	negative regulation of post-embryonic development	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0050826	response to freezing	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0051322	anaphase	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
CC	GO:0055028	cortical microtubule	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
CC	GO:0072686	mitotic spindle	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
BP	GO:2000014	regulation of endosperm development	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006867	DUF632	305	631
IPR006868	DUF630	1	59

External Links

No external refs found!

AT4G30130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation