AT4G29360

Description : O-Glycosyl hydrolases family 17 protein

Gene families : OG0002535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002535_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G29360

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00158530	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.11	OrthoFinder output from all 47 species
Aev_g19748	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27614	No alias	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Als_g11891	No alias	EC_3.2 glycosylase & original description: none	0.09	OrthoFinder output from all 47 species
Als_g27686	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04338	No alias	EC_3.2 glycosylase & original description: none	0.1	OrthoFinder output from all 47 species
Aspi01Gene38106.t1	Aspi01Gene38106	EC_3.2 glycosylase & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.15G053700.1	Ceric.15G053700	EC_3.2 glycosylase & original description:...	0.08	OrthoFinder output from all 47 species
Ceric.29G070700.1	Ceric.29G070700	EC_3.2 glycosylase & original description:...	0.15	OrthoFinder output from all 47 species
Dac_g15313	No alias	EC_3.2 glycosylase & original description: none	0.09	OrthoFinder output from all 47 species
Dac_g16552	No alias	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g37077	No alias	EC_3.2 glycosylase & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g40044	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015282001	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_19444	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os01g53750.1	LOC_Os01g53750	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g01266	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Len_g02790	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g16381	No alias	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
MA_51690g0010	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp6g13240.1	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g14680	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g31395	No alias	EC_3.2 glycosylase & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g11777	No alias	EC_3.2 glycosylase & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g14136	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14869	No alias	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011980	No alias	EC_3.2 glycosylase & original description: CDS=1-1419	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014084	No alias	EC_3.2 glycosylase & original description: CDS=1-1821	0.03	OrthoFinder output from all 47 species
Sam_g29581	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g49364	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc12g008580.2.1	Solyc12g008580	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.1	OrthoFinder output from all 47 species
Spa_g51982	No alias	EC_3.2 glycosylase & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g04598	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g12160	No alias	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e019867_P001	Zm00001e019867	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	RCA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016570	histone modification	RCA	Interproscan
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	RCA	Interproscan
BP	GO:0031048	RNA-mediated heterochromatin formation	RCA	Interproscan
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0042127	regulation of cell population proliferation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
CC	GO:0046658	obsolete anchored component of plasma membrane	IDA	Interproscan
BP	GO:0048449	floral organ formation	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0000912	assembly of actomyosin apparatus involved in cytokinesis	IEP	HCCA
BP	GO:0000914	phragmoplast assembly	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
CC	GO:0009574	preprophase band	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016458	obsolete gene silencing	IEP	HCCA
BP	GO:0016572	obsolete histone phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032411	positive regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032414	positive regulation of ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032506	cytokinetic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034764	positive regulation of transmembrane transport	IEP	HCCA
BP	GO:0034767	positive regulation of monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0035173	histone kinase activity	IEP	HCCA
MF	GO:0035184	histone threonine kinase activity	IEP	HCCA
MF	GO:0035402	histone H3T11 kinase activity	IEP	HCCA
BP	GO:0035407	obsolete histone H3-T11 phosphorylation	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043270	positive regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0044070	regulation of monoatomic anion transport	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0051050	positive regulation of transport	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071588	hydrogen peroxide mediated signaling pathway	IEP	HCCA
MF	GO:0072354	histone H3T3 kinase activity	IEP	HCCA
BP	GO:0072355	obsolete histone H3-T3 phosphorylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901527	abscisic acid-activated signaling pathway involved in stomatal movement	IEP	HCCA
BP	GO:1901528	hydrogen peroxide mediated signaling pathway involved in stomatal movement	IEP	HCCA
BP	GO:1901529	positive regulation of anion channel activity	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902407	assembly of actomyosin apparatus involved in mitotic cytokinesis	IEP	HCCA
BP	GO:1902410	mitotic cytokinetic process	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
BP	GO:1903793	positive regulation of monoatomic anion transport	IEP	HCCA
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	IEP	HCCA
BP	GO:1903961	positive regulation of anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000490	Glyco_hydro_17	27	345
IPR012946	X8	390	461

External Links

No external refs found!

AT4G29360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation