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  5. AT4G25070

AT4G25070


Description : unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 14837 Blast hits to 10961 proteins in 1163 species: Archae - 189; Bacteria - 1924; Metazoa - 7665; Fungi - 1127; Plants - 653; Viruses - 80; Other Eukaryotes - 3199 (source: NCBI BLink).


Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25070
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00146260 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.05 OrthoFinder output from all 47 species
Als_g44197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05994 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os11g31950.1 LOC_Os11g31950 SCD2 component of post-Golgi trafficking SCD complex 0.04 OrthoFinder output from all 47 species
Mp4g21130.1 No alias SCD2 component of post-Golgi trafficking SCD complex 0.04 OrthoFinder output from all 47 species
Mp8g07740.1 No alias Coiled-coil domain-containing protein SCD2... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009985 No alias not classified & original description: CDS=162-1658 0.03 OrthoFinder output from all 47 species
Solyc03g118390.3.1 Solyc03g118390 SCD2 component of post-Golgi trafficking SCD complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0014074 response to purine-containing compound IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016174 NAD(P)H oxidase H2O2-forming activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
MF GO:0031219 levanase activity IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033198 response to ATP IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046683 response to organophosphorus IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051670 inulinase activity IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!