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  5. AT4G24990

AT4G24990 (ATGP4)


Aliases : ATGP4

Description : Ubiquitin family protein


Gene families : OG0001418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24990

Target Alias Description ECC score Gene Family Method Actions
AT3G26980 MUB4 membrane-anchored ubiquitin-fold protein 4 precursor 0.05 OrthoFinder output from all 47 species
Adi_g022486 MUB6 MUB ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13175 MUB1 MUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16071 MUB6 MUB ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34885 MUB6 MUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15136 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010987001 ATGP4 Protein degradation.peptide... 0.05 OrthoFinder output from all 47 species
GSVIVT01011498001 MUB1 Protein degradation.peptide... 0.05 OrthoFinder output from all 47 species
GSVIVT01033043001 MUB4 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Msp_g06765 MUB6 MUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010310 MUB6 MUB ubiquitin-fold protein & original description: CDS=1-411 0.04 OrthoFinder output from all 47 species
Sam_g18908 No alias MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g088620.3.1 MUB2, Solyc02g088620 ubiquitin-fold protein (MUB) 0.05 OrthoFinder output from all 47 species
Solyc04g072640.3.1 MUB6, Solyc04g072640 ubiquitin-fold protein (MUB) 0.04 OrthoFinder output from all 47 species
Zm00001e023882_P001 MUB6, Zm00001e023882 ubiquitin-fold protein (MUB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0010286 heat acclimation RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048102 autophagic cell death IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR039540 UBL3-like_ubiquitin_dom 5 116
No external refs found!