AT4G18350 (NCED2, ATNCED2)

Aliases : NCED2, ATNCED2

Description : nine-cis-epoxycarotenoid dioxygenase 2

Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18350
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00256600	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00039p00194530	NCED3, SIS7,...	Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species
AT1G30100	ATNCED5, NCED5	nine-cis-epoxycarotenoid dioxygenase 5	0.07	OrthoFinder output from all 47 species
AT3G14440	NCED3, SIS7,...	nine-cis-epoxycarotenoid dioxygenase 3	0.04	OrthoFinder output from all 47 species
Aev_g05406	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Als_g18482	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Aspi01Gene19977.t1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Aspi01Gene29851.t1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.06	OrthoFinder output from all 47 species
Azfi_s0010.g012346	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Cba_g02022	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Ceric.03G078900.1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Ceric.23G042200.1	CCD4, NCED4,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Dac_g28064	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Dac_g39217	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
GSVIVT01038080001	NCED3, SIS7,...	Enzyme classification.EC_1 oxidoreductases.EC_1.13...	0.05	OrthoFinder output from all 47 species
Gb_04986	CCD4, NCED4	carotenoid cleavage dioxygenase (CCD4)	0.08	OrthoFinder output from all 47 species
Gb_07367	NCED3, SIS7,...	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.05	OrthoFinder output from all 47 species
LOC_Os02g47510.1	CCD4, NCED4,...	carotenoid cleavage dioxygenase (CCD4)	0.03	OrthoFinder output from all 47 species
LOC_Os07g05940.1	ATNCED9, NCED9,...	neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species
MA_10428396g0010	CCD4, NCED4	carotenoid cleavage dioxygenase (CCD4)	0.03	OrthoFinder output from all 47 species
MA_10428505g0020	NCED3, SIS7,...	neoxanthin cleavage protein	0.02	OrthoFinder output from all 47 species
MA_90573g0010	CCD4, NCED4	carotenoid cleavage dioxygenase (CCD4)	0.03	OrthoFinder output from all 47 species
Mp3g20700.1	ATNCED5, NCED5	neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species
Msp_g38713	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Nbi_g14297	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Ore_g18596	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Ore_g36229	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Pir_g11311	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Ppi_g43883	CCD4, NCED4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10352	No alias	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Solyc07g056570.1.1	NCED3, SIS7,...	neoxanthin cleavage protein	0.02	OrthoFinder output from all 47 species
Solyc08g016720.1.1	NCED3, SIS7,...	neoxanthin cleavage protein	0.08	OrthoFinder output from all 47 species
Solyc08g075480.4.1	CCD4, NCED4,...	carotenoid cleavage dioxygenase (CCD4)	0.04	OrthoFinder output from all 47 species
Spa_g15240	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Zm00001e017976_P001	NCED3, SIS7,...	neoxanthin cleavage protein	0.02	OrthoFinder output from all 47 species
Zm00001e032833_P001	ATNCED9, NCED9,...	neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009687	abscisic acid metabolic process	None	Extended
BP	GO:0009688	abscisic acid biosynthetic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010436	carotenoid dioxygenase activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043289	apocarotenoid biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IDA	Interproscan
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	ISS	Interproscan
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1902645	tertiary alcohol biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	IEP	HCCA
CC	GO:0000325	plant-type vacuole	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008506	sucrose:proton symporter activity	IEP	HCCA
MF	GO:0008515	sucrose transmembrane transporter activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
MF	GO:0009669	sucrose:monoatomic cation symporter activity	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010101	post-embryonic root morphogenesis	IEP	HCCA
BP	GO:0010102	lateral root morphogenesis	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
CC	GO:0010282	senescence-associated vacuole	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015154	disaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015157	oligosaccharide transmembrane transporter activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045490	pectin catabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	121	575

External Links

No external refs found!

AT4G18350 (NCED2, ATNCED2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation