AT4G17140

Description : pleckstrin homology (PH) domain-containing protein

Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G17140

Target	Alias	Description	ECC score	Gene Family Method
Aev_g17458	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g19181	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05070	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene55587.t1	Aspi01Gene55587	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021428.20	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cre17.g730650	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dde_g20978	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013270001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01017643001	No alias	No description available	0.03	OrthoFinder output from all 47 species
MA_119498g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_74056g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Ore_g25798	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17487	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g077500.4.1	Solyc08g077500	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0007009	plasma membrane organization	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
MF	GO:0042800	histone H3K4 methyltransferase activity	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
MF	GO:0140938	histone H3 methyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR031642	VPS13_mid_RBG	561	782
IPR026854	VPS13-like_N	2	107
IPR031646	VPS13_extend_chorein	133	374
IPR009291	Vps62	1968	2121
IPR009291	Vps62	2192	2339

External Links

No external refs found!

AT4G17140

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation