Aliases : LDL3
Description : LSD1-like 3
Gene families : OG0003426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00182p00016710 | LDL3,... | Chromatin organisation.histone modifications.histone... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g011994 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.14 | OrthoFinder output from all 47 species | |
Aev_g06185 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ala_g05833 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ala_g11027 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g22303 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Aob_g13453 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g27045 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46596.t1 | LDL3, Aspi01Gene46596 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene66928.t1 | LDL3, Aspi01Gene66928 | histone demethylase *(KDM1d) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Azfi_s0054.g033788 | LDL3 | histone demethylase *(KDM1d) & original description: CDS=1-6162 | 0.06 | OrthoFinder output from all 47 species | |
Cba_g14216 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G013700.1 | LDL3, Ceric.04G013700 | histone demethylase *(KDM1d) & original description:... | 0.17 | OrthoFinder output from all 47 species | |
Ceric.12G094400.1 | LDL3, Ceric.12G094400 | histone demethylase *(KDM1d) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g07791 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g10965 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.19 | OrthoFinder output from all 47 species | |
Dcu_g10966 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g01702 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009833001 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.1 | OrthoFinder output from all 47 species | |
GSVIVT01009834001 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.22 | OrthoFinder output from all 47 species | |
Gb_40614 | LDL3 | lysine-specific demethylase (LDL3) | 0.18 | OrthoFinder output from all 47 species | |
LOC_Os10g38850.1 | LDL3, LOC_Os10g38850 | lysine-specific demethylase (LDL3) | 0.05 | OrthoFinder output from all 47 species | |
Len_g18074 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g04294 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
MA_120420g0010 | No alias | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
MA_120420g0020 | LDL3 | lysine-specific demethylase (LDL3) | 0.2 | OrthoFinder output from all 47 species | |
MA_7050228g0010 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g14381 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Msp_g38960 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g08319 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g40775 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ore_g28867 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Pir_g11421 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pp3c1_1170V3.1 | LDL3, Pp3c1_1170 | LSD1-like 3 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_6380V3.1 | LDL3, Pp3c1_6380 | LSD1-like 3 | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g02424 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g14951 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Sam_g36106 | No alias | histone demethylase *(KDM1d) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Smo405878 | LDL3 | Chromatin organisation.histone modifications.histone... | 0.12 | OrthoFinder output from all 47 species | |
Solyc04g081100.3.1 | LDL3, Solyc04g081100 | lysine-specific demethylase (LDL3) | 0.12 | OrthoFinder output from all 47 species | |
Spa_g10310 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.13 | OrthoFinder output from all 47 species | |
Spa_g26760 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e002184_P001 | LDL3, Zm00001e002184 | lysine-specific demethylase (LDL3) | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005739 | mitochondrion | ISM | Interproscan |
MF | GO:0008131 | primary amine oxidase activity | ISS | Interproscan |
BP | GO:0009851 | auxin biosynthetic process | RCA | Interproscan |
BP | GO:0010229 | inflorescence development | RCA | Interproscan |
BP | GO:0048825 | cotyledon development | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000003 | reproduction | IEP | HCCA |
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
BP | GO:0000278 | mitotic cell cycle | IEP | HCCA |
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
BP | GO:0000902 | cell morphogenesis | IEP | HCCA |
BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | HCCA |
BP | GO:0000910 | cytokinesis | IEP | HCCA |
BP | GO:0000911 | cytokinesis by cell plate formation | IEP | HCCA |
BP | GO:0002376 | immune system process | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005769 | early endosome | IEP | HCCA |
CC | GO:0005911 | cell-cell junction | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
BP | GO:0006955 | immune response | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007015 | actin filament organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007049 | cell cycle | IEP | HCCA |
BP | GO:0007059 | chromosome segregation | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
BP | GO:0007131 | reciprocal meiotic recombination | IEP | HCCA |
BP | GO:0007155 | cell adhesion | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
BP | GO:0009314 | response to radiation | IEP | HCCA |
CC | GO:0009506 | plasmodesma | IEP | HCCA |
BP | GO:0009556 | microsporogenesis | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009606 | tropism | IEP | HCCA |
BP | GO:0009615 | response to virus | IEP | HCCA |
BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
BP | GO:0009629 | response to gravity | IEP | HCCA |
BP | GO:0009630 | gravitropism | IEP | HCCA |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
BP | GO:0009737 | response to abscisic acid | IEP | HCCA |
BP | GO:0009787 | regulation of abscisic acid-activated signaling pathway | IEP | HCCA |
BP | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | IEP | HCCA |
BP | GO:0009887 | animal organ morphogenesis | IEP | HCCA |
BP | GO:0009888 | tissue development | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
BP | GO:0009908 | flower development | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
BP | GO:0009910 | negative regulation of flower development | IEP | HCCA |
BP | GO:0010053 | root epidermal cell differentiation | IEP | HCCA |
BP | GO:0010090 | trichome morphogenesis | IEP | HCCA |
BP | GO:0010199 | organ boundary specification between lateral organs and the meristem | IEP | HCCA |
BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
BP | GO:0010213 | non-photoreactive DNA repair | IEP | HCCA |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | HCCA |
BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
BP | GO:0010332 | response to gamma radiation | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0010638 | positive regulation of organelle organization | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
BP | GO:0016441 | post-transcriptional gene silencing | IEP | HCCA |
CC | GO:0016514 | SWI/SNF complex | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019216 | regulation of lipid metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0021700 | developmental maturation | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
CC | GO:0030054 | cell junction | IEP | HCCA |
BP | GO:0030154 | cell differentiation | IEP | HCCA |
BP | GO:0030422 | siRNA processing | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0031507 | heterochromatin formation | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0032504 | multicellular organism reproduction | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
BP | GO:0033993 | response to lipid | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0035196 | miRNA processing | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0035825 | homologous recombination | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0040007 | growth | IEP | HCCA |
BP | GO:0040029 | epigenetic regulation of gene expression | IEP | HCCA |
BP | GO:0040034 | regulation of development, heterochronic | IEP | HCCA |
BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
MF | GO:0043621 | protein self-association | IEP | HCCA |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0045010 | actin nucleation | IEP | HCCA |
BP | GO:0045087 | innate immune response | IEP | HCCA |
BP | GO:0045132 | meiotic chromosome segregation | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0048441 | petal development | IEP | HCCA |
BP | GO:0048469 | cell maturation | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
BP | GO:0048764 | trichoblast maturation | IEP | HCCA |
BP | GO:0048765 | root hair cell differentiation | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0048859 | formation of anatomical boundary | IEP | HCCA |
BP | GO:0048869 | cellular developmental process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0050994 | regulation of lipid catabolic process | IEP | HCCA |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051607 | defense response to virus | IEP | HCCA |
BP | GO:0052386 | cell wall thickening | IEP | HCCA |
BP | GO:0052543 | callose deposition in cell wall | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0061982 | meiosis I cell cycle process | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
CC | GO:0070161 | anchoring junction | IEP | HCCA |
BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0070828 | heterochromatin organization | IEP | HCCA |
BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0071695 | anatomical structure maturation | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090213 | regulation of radial pattern formation | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | HCCA |
BP | GO:0090627 | plant epidermal cell differentiation | IEP | HCCA |
BP | GO:0090691 | formation of plant organ boundary | IEP | HCCA |
BP | GO:0097305 | response to alcohol | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
BP | GO:0098813 | nuclear chromosome segregation | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
BP | GO:0140527 | reciprocal homologous recombination | IEP | HCCA |
BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901419 | regulation of response to alcohol | IEP | HCCA |
BP | GO:1901420 | negative regulation of response to alcohol | IEP | HCCA |
BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
CC | GO:1904949 | ATPase complex | IEP | HCCA |
BP | GO:1905957 | regulation of cellular response to alcohol | IEP | HCCA |
BP | GO:1905958 | negative regulation of cellular response to alcohol | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000242 | negative regulation of reproductive process | IEP | HCCA |
No external refs found! |