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Description : Plant self-incompatibility protein S1 family
Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G16195 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04645 | No alias | Plant self-incompatibility protein S1 family | 0.05 | OrthoFinder output from all 47 species | |
| AT3G17080 | No alias | Plant self-incompatibility protein S1 family | 0.07 | OrthoFinder output from all 47 species | |
| AT4G24973 | No alias | Plant self-incompatibility protein S1 family | 0.05 | OrthoFinder output from all 47 species | |
| AT5G12070 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014872001 | No alias | S-protein homolog 3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014873001 | No alias | S-protein homolog 2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014874001 | No alias | S-protein homolog 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014884001 | No alias | S-protein homolog 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g025660.1.1 | Solyc03g025660 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g011100.1.1 | Solyc09g011100 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g091290.1.1 | Solyc09g091290 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g091340.1.1 | Solyc09g091340 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g092370.1.1 | Solyc09g092370 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g086610.1.1 | Solyc10g086610 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009739 | response to gibberellin | IEP | HCCA |
| BP | GO:0009827 | plant-type cell wall modification | IEP | HCCA |
| BP | GO:0009828 | plant-type cell wall loosening | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010264 | Self-incomp_S1 | 49 | 156 |
| No external refs found! |