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  5. AT4G16141

AT4G16141


Description : GATA type zinc finger transcription factor family protein


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G16141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00210810 GATA5,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Adi_g024585 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088429 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13178 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30025.t1 GATA5, Aspi01Gene30025 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06438 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06887 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g45650.2 GATA5, LOC_Os04g45650 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g44400.1 GATA12, LOC_Os05g44400 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Len_g54486 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15675 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53963 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g033660.4.1 GATA5, Solyc03g033660 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Tin_g18035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006272_P001 GATA17, Zm00001e006272 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e020243_P001 GATA20, Zm00001e020243 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 39 73
No external refs found!