AT4G13510 (ATAMT1, AMT1;1, ATAMT1;1)

Aliases : ATAMT1, AMT1;1, ATAMT1;1

Description : ammonium transporter 1;1

Gene families : OG0001233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001233_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13510

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00050p00217870	ATAMT1, AMT1;1,...	Solute transport.channels.AMT family.ammonium...	0.03	OrthoFinder output from all 47 species
AT3G24300	AMT1;3, ATAMT1;3	ammonium transporter 1;3	0.06	OrthoFinder output from all 47 species
Ala_g27462	ATAMT1, AMT1;1, ATAMT1;1	ammonium transporter *(AMT1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g40850	AMT1;3, ATAMT1;3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.23G069300.1	AMT1;2,...	ammonium transporter *(AMT1) & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000241.89	AMT1;5	Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001496.4	AMT1;2, ATAMT1;2	Solute transport.channels.AMT family.ammonium...	0.02	OrthoFinder output from all 47 species
GSVIVT01001853001	ATAMT1, AMT1;1, ATAMT1;1	Ammonium transporter 1 member 1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_41196	No alias	ammonium transporter (AMT1)	0.04	OrthoFinder output from all 47 species
LOC_Os02g40710.1	ATAMT1, AMT1;1,...	ammonium transporter (AMT1)	0.04	OrthoFinder output from all 47 species
LOC_Os02g40730.1	ATAMT1, AMT1;1,...	ammonium transporter (AMT1)	0.03	OrthoFinder output from all 47 species
MA_369429g0010	AMT1;2, ATAMT1;2	ammonium transporter (AMT1)	0.03	OrthoFinder output from all 47 species
Mp6g08310.1	AMT1;3, ATAMT1;3	ammonium transporter (AMT1)	0.05	OrthoFinder output from all 47 species
Mp8g00360.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp8g05280.1	AMT1;2, ATAMT1;2	ammonium transporter (AMT1)	0.03	OrthoFinder output from all 47 species
Mp8g05300.1	AMT1;2, ATAMT1;2	ammonium transporter (AMT1)	0.02	OrthoFinder output from all 47 species
Ppi_g03031	AMT1;2, ATAMT1;2	ammonium transporter *(AMT1) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g18688	AMT1;2, ATAMT1;2	ammonium transporter *(AMT1) & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018510	AMT1;3, ATAMT1;3	ammonium transporter *(AMT1) & original description: CDS=1-1419	0.04	OrthoFinder output from all 47 species
Smo163770	AMT1;3, ATAMT1;3	Solute transport.channels.AMT family.ammonium...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	RCA	Interproscan
BP	GO:0001763	morphogenesis of a branching structure	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	ISS	Interproscan
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	RCA	Interproscan
BP	GO:0006862	nucleotide transport	RCA	Interproscan
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008519	ammonium transmembrane transporter activity	IDA	Interproscan
MF	GO:0008519	ammonium transmembrane transporter activity	IMP	Interproscan
MF	GO:0008519	ammonium transmembrane transporter activity	ISS	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IDA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010311	lateral root formation	IMP	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015695	organic cation transport	IMP	Interproscan
BP	GO:0015748	organophosphate ester transport	None	Extended
BP	GO:0015802	basic amino acid transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	RCA	Interproscan
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	RCA	Interproscan
BP	GO:0043090	amino acid import	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	RCA	Interproscan
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051258	protein polymerization	IDA	Interproscan
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
BP	GO:0080181	lateral root branching	IMP	Interproscan
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000224	peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	IEP	HCCA
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009636	response to toxic substance	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010188	response to microbial phytotoxin	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010942	positive regulation of cell death	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0043068	positive regulation of programmed cell death	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0051865	protein autoubiquitination	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024041	NH4_transpt_AmtB-like_dom	45	467

External Links

No external refs found!

AT4G13510 (ATAMT1, AMT1;1, ATAMT1;1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation