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  5. AT4G12070

AT4G12070


Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0002225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12070

Target Alias Description ECC score Gene Family Method Actions
Aev_g18542 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g43035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0485.g073399 No alias not classified & original description: CDS=327-1682 0.03 OrthoFinder output from all 47 species
Cba_g12184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22072 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g38087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035443001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_32639 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_37248 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g48640.1 LOC_Os02g48640 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g13771 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g04854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g056620.3.1 Solyc11g056620 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Tin_g09358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015656_P001 Zm00001e015656 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e034532_P002 Zm00001e034532 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
MF GO:0005355 glucose transmembrane transporter activity IEP HCCA
MF GO:0005365 myo-inositol transmembrane transporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015146 pentose transmembrane transporter activity IEP HCCA
MF GO:0015148 D-xylose transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
MF GO:0015166 polyol transmembrane transporter activity IEP HCCA
MF GO:0015168 glycerol transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0015575 mannitol transmembrane transporter activity IEP HCCA
MF GO:0015576 sorbitol transmembrane transporter activity IEP HCCA
MF GO:0015591 D-ribose transmembrane transporter activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA

No InterPro domains available for this sequence

No external refs found!